You are here

Home

ATCC64974_48450-T1, ATCC64974_48450-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48450-T1
Unique NameATCC64974_48450-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1646068..1647278-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48450-T1 ID=ATCC64974_48450-T1|Name=ATCC64974_48450-T1|organism=Aspergillus niger N402|type=mRNA|length=1211bp|location=Sequence derived from alignment at OGUI01000007.1:1646068..1647278- (Aspergillus niger N402)
ATGTTCCTCCAACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCG
GGCTCTCGCTGCCCGTCCCTTTTCTTCCTCCGTCACCCGCTGTACGTGAC
CCTCATCGTCAGATCAAAAGACCGCCTCTTCTGCACCCCAGCAGTGGCAG
CCATCCCTTCTCTACCGCGCTGCCATGGCCTCTATATGTGCCAATTGCAC
GGGAATGTGGATGTCTGATCTGGATATACGAGCTAACATGCCATTGCTGC
TCCTATAGTCAACAGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGATCC
TTTCTTTCGATGGTGAGTGGCCTCACATCCACTCCTACATGAAGCGTCAA
TTATCCCTACGGATACACGTGCAAGATAGCAATTGCGACTCGTACGGCGA
GTGAACATTGCAATTGGGCATCTTATGCGGGGTTTCGGGCGCTGGGGACA
TTTGATAGCCGGCTACTTGCATCCTCTCGATGCCTTGATATATGGTTGAC
ATCATACTGATTGTGCGCTTTTTTCCTGAACAGAGATCAAGACCGAGGAA
GACCTCATCCCCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGA
GCACGCCACTGGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCA
TTGATATCTTCGACATGCGTCCCCTCGATGCCTCCCGCAAGGGTATGTCA
TACGCTATTCCGCTCTGTGCGGTGTCTACCGGAGTCTTGAATAGATGACT
CGCGCGGGTGGGAGCTGATATAATGTTTTATAGGAACCCTCGAGAACCCC
ATCATCGTCAACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTT
CCCCGCCGACTCTCACCAGGTCAACTGGCTGACTGTAAGCCGAATTCTTC
CGTGCTGTTTACCTCCTGTGATAGCATGATCCCTAATCAAGCCACAATAC
AGGTCTCCCGTGACCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTT
GTCAAGCTGAACTACGTCGGCCCCTTGGAGGACCCCCACGCTCGTAAGTA
ACTTCCCTTTCAATTCAGCCCCAGTTGATGGCTATCATTCGGTGTGCGGT
GTACTAATTGCTCTCTGTCCAGACGACCACGACCACGGTCACGGCCACCC
TCCCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGTACT
GGTACCGGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1646068..1647278-

>ATCC64974_48450-T1 ID=ATCC64974_48450-T1|Name=ATCC64974_48450-T1|organism=Aspergillus niger N402|type=CDS|length=3510bp|location=Sequence derived from alignment at OGUI01000007.1:1646068..1647278- (Aspergillus niger N402)
ACGACCACGACCACGGTCACGGCCACCCTCCCCATGAGGAGCCCAAGACC
TTCGCCGACTTCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGA
CCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACT
ACGTCGGCCCCTTGGAGGACCCCCACGCTCGAACCCTCGAGAACCCCATC
ATCGTCAACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCC
CGCCGACTCTCACCAGGTCAACTGGCTGACTAGATCAAGACCGAGGAAGA
CCTCATCCCCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGC
ACGCCACTGGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATT
GATATCTTCGACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAA
GAAGTATGAGGTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTC
CTCCAACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCT
CGCTGCCCGTCCCTTTTCTTCCTCCGTCACCCGCTACGACCACGACCACG
GTCACGGCCACCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTC
AAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCG
CTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGG
AGGACCCCCACGCTCGAACCCTCGAGAACCCCATCATCGTCAACGGTGCT
GGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCA
GGTCAACTGGCTGACTAGATCAAGACCGAGGAAGACCTCATCCCCCCGGG
TGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGCACGCCACTGGTCTCG
AGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATTGATATCTTCGACATG
CGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAA
GCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTCCTCCAACGCACAGCC
TTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTT
TTCTTCCTCCGTCACCCGCTACGACCACGACCACGGTCACGGCCACCCTC
CCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGTACTGG
TACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCGCTGCGGCGAGTGCGG
TAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGGAGGACCCCCACGCTC
GAACCCTCGAGAACCCCATCATCGTCAACGGTGCTGGTGACGAGCAGTAC
GCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCAGGTCAACTGGCTGAC
TAGATCAAGACCGAGGAAGACCTCATCCCCCCGGGTGCTAAGTCCGGTAC
CGTTCCCGCCGATATCGAGCACGCCACTGGTCTCGAGCGTCTCGAACTCG
TTGGAAAGATGCAGGGCATTGATATCTTCGACATGCGTCCCCTCGATGCC
TCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGAT
CCTTTCTTTCGATGATGTTCCTCCAACGCACAGCCTTCGCCCTCGCCAGG
CGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTTTTCTTCCTCCGTCAC
CCGCTACGACCACGACCACGGTCACGGCCACCCTCCCCATGAGGAGCCCA
AGACCTTCGCCGACTTCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCC
CGTGACCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCT
GAACTACGTCGGCCCCTTGGAGGACCCCCACGCTCGAACCCTCGAGAACC
CCATCATCGTCAACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGT
TTCCCCGCCGACTCTCACCAGGTCAACTGGCTGACTAGATCAAGACCGAG
GAAGACCTCATCCCCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATAT
CGAGCACGCCACTGGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGG
GCATTGATATCTTCGACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAAC
AGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGA
TGTTCCTCCAACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGG
GCTCTCGCTGCCCGTCCCTTTTCTTCCTCCGTCACCCGCTACGACCACGA
CCACGGTCACGGCCACCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACT
TCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATC
GAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCC
CTTGGAGGACCCCCACGCTCGAACCCTCGAGAACCCCATCATCGTCAACG
GTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCT
CACCAGGTCAACTGGCTGACTAGATCAAGACCGAGGAAGACCTCATCCCC
CCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGCACGCCACTGG
TCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATTGATATCTTCG
ACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAG
GTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTCCTCCAACGCA
CAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGT
CCCTTTTCTTCCTCCGTCACCCGCTACGACCACGACCACGGTCACGGCCA
CCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGT
ACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCGCTGCGGCGAG
TGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGGAGGACCCCCA
CGCTCGAACCCTCGAGAACCCCATCATCGTCAACGGTGCTGGTGACGAGC
AGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCAGGTCAACTGG
CTGACTAGATCAAGACCGAGGAAGACCTCATCCCCCCGGGTGCTAAGTCC
GGTACCGTTCCCGCCGATATCGAGCACGCCACTGGTCTCGAGCGTCTCGA
ACTCGTTGGAAAGATGCAGGGCATTGATATCTTCGACATGCGTCCCCTCG
ATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAAGCAGGAGGGC
AAGATCCTTTCTTTCGATGATGTTCCTCCAACGCACAGCCTTCGCCCTCG
CCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTTTTCTTCCTCC
GTCACCCGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX4ATCC64974_48450Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48450-T1ATCC64974_48450-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48450-T1.cdsATCC64974_48450-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48450-T1.exon6ATCC64974_48450-T1.exon6Aspergillus niger N402exon
ATCC64974_48450-T1.exon5ATCC64974_48450-T1.exon5Aspergillus niger N402exon
ATCC64974_48450-T1.exon4ATCC64974_48450-T1.exon4Aspergillus niger N402exon
ATCC64974_48450-T1.exon3ATCC64974_48450-T1.exon3Aspergillus niger N402exon
ATCC64974_48450-T1.exon2ATCC64974_48450-T1.exon2Aspergillus niger N402exon
ATCC64974_48450-T1.exon1ATCC64974_48450-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09265MAN
DBxrefInterPro:IPR002124
DBxrefInterPro:IPR036972
DBxrefPFAM:PF01215
ProductCytochrome c oxidase subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1646068..1647278 -
Powered by Drupal