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ATCC64974_48460-T1, ATCC64974_48460-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48460-T1
Unique NameATCC64974_48460-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1647888..1648949-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48460-T1 ID=ATCC64974_48460-T1|Name=ATCC64974_48460-T1|organism=Aspergillus niger N402|type=mRNA|length=1062bp|location=Sequence derived from alignment at OGUI01000007.1:1647888..1648949- (Aspergillus niger N402)
ATGTCCGCGACGCTGGCGGATCCGTATCGAGAGTATGCTATTGATTATTC
TCAACATGCTACCTGCAAACCTGAGGAACACGCAGGCACGCTTGTTTACC
ACGCACAGCAGCCGCATCTCCAGCACCATAAGCAGCCCGAGCCTCCATTC
TCTCAGGGAGCCTCTCATAGCACGACGGCATTTGAGCAACATCATGCGAA
CGCGACCGTGTTATCAGCAGCCACTCAGCAACCGTCAGTTCATGATATGT
CGCAGAGCGTTGTCCTCGGCCCGCCCCAGATGCTCCCACGACACCTTCCA
GTGCAGTATCCACCTGCCAGCTTCGAAATCCCCCCTATCCAGCGCGAGAA
AAAACGCCATCACTCGGAGACCGAAGAGGATGGGAACCCCGACCATGGCC
TGCGGCCGCAGCTATCAGTCCTCTCAGCTGACGCCCCTCACGAACCCTCG
CACTCTCCCGAAATGCTCTTCGGTGTCCATGGCGCATCATCTCAGCAGCA
TCCCATGTCAAACCATGGCTTTGGGCCCACGGACTCTGTGGCCCTGCCGC
AACATCACCATCACCATCGACTCCCGCCCCATGCAGCGCTGCGCGCCCCA
GGGCGTCATGGAGTGAATGTGGAATCTCCTCCTTTGCCCTCGGGCCCGCC
GAGTGTGGTGGGCCAGCCTGGAATGCCTGATCCAGCCCCCAGGCCTCGAG
GACCAAAACTGAAGTTTACTCCCGAAGAGGACGCTCTACTGGTGGAGTTG
AAGGAAAACAAGAACTTGACGTGGAAGCAAATTGCAGACTTCTTCCCGGG
CCGAACGAGCGGTACCTTGCAAGTCCGATACTGCACCAAGCTGAAGGCTA
AGGATGTAGCTTGGAGTGACGAAATGGTTCGATTTGCTCCTGATGTATTT
CTACGCCTGTCTCACACATGCTAATGAAGGGAATAGGTACAAAGGCTGCA
GCGGGCAATGCACGAGTACGAGAACGATCGGTGGCGCATCATTGCAGGGA
AGGTTGGAAATGGCTTCACCCCAGCTGCTTGCCGCGAGAAAGCCATGCAG
CTCCATGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1647888..1648949-

>ATCC64974_48460-T1 ID=ATCC64974_48460-T1|Name=ATCC64974_48460-T1|organism=Aspergillus niger N402|type=CDS|length=2004bp|location=Sequence derived from alignment at OGUI01000007.1:1647888..1648949- (Aspergillus niger N402)
GTACAAAGGCTGCAGCGGGCAATGCACGAGTACGAGAACGATCGGTGGCG
CATCATTGCAGGGAAGGTTGGAAATGGCTTCACCCCAGCTGCTTGCCGCG
AGAAAGCCATGCAGCTCCATGAGTAAATGTCCGCGACGCTGGCGGATCCG
TATCGAGAGTATGCTATTGATTATTCTCAACATGCTACCTGCAAACCTGA
GGAACACGCAGGCACGCTTGTTTACCACGCACAGCAGCCGCATCTCCAGC
ACCATAAGCAGCCCGAGCCTCCATTCTCTCAGGGAGCCTCTCATAGCACG
ACGGCATTTGAGCAACATCATGCGAACGCGACCGTGTTATCAGCAGCCAC
TCAGCAACCGTCAGTTCATGATATGTCGCAGAGCGTTGTCCTCGGCCCGC
CCCAGATGCTCCCACGACACCTTCCAGTGCAGTATCCACCTGCCAGCTTC
GAAATCCCCCCTATCCAGCGCGAGAAAAAACGCCATCACTCGGAGACCGA
AGAGGATGGGAACCCCGACCATGGCCTGCGGCCGCAGCTATCAGTCCTCT
CAGCTGACGCCCCTCACGAACCCTCGCACTCTCCCGAAATGCTCTTCGGT
GTCCATGGCGCATCATCTCAGCAGCATCCCATGTCAAACCATGGCTTTGG
GCCCACGGACTCTGTGGCCCTGCCGCAACATCACCATCACCATCGACTCC
CGCCCCATGCAGCGCTGCGCGCCCCAGGGCGTCATGGAGTGAATGTGGAA
TCTCCTCCTTTGCCCTCGGGCCCGCCGAGTGTGGTGGGCCAGCCTGGAAT
GCCTGATCCAGCCCCCAGGCCTCGAGGACCAAAACTGAAGTTTACTCCCG
AAGAGGACGCTCTACTGGTGGAGTTGAAGGAAAACAAGAACTTGACGTGG
AAGCAAATTGCAGACTTCTTCCCGGGCCGAACGAGCGGTACCTTGCAAGT
CCGATACTGCACCAAGCTGAAGGCTAAGGATGTAGCTTGGAGTGACGAAA
TGGTACAAAGGCTGCAGCGGGCAATGCACGAGTACGAGAACGATCGGTGG
CGCATCATTGCAGGGAAGGTTGGAAATGGCTTCACCCCAGCTGCTTGCCG
CGAGAAAGCCATGCAGCTCCATGAGTAAATGTCCGCGACGCTGGCGGATC
CGTATCGAGAGTATGCTATTGATTATTCTCAACATGCTACCTGCAAACCT
GAGGAACACGCAGGCACGCTTGTTTACCACGCACAGCAGCCGCATCTCCA
GCACCATAAGCAGCCCGAGCCTCCATTCTCTCAGGGAGCCTCTCATAGCA
CGACGGCATTTGAGCAACATCATGCGAACGCGACCGTGTTATCAGCAGCC
ACTCAGCAACCGTCAGTTCATGATATGTCGCAGAGCGTTGTCCTCGGCCC
GCCCCAGATGCTCCCACGACACCTTCCAGTGCAGTATCCACCTGCCAGCT
TCGAAATCCCCCCTATCCAGCGCGAGAAAAAACGCCATCACTCGGAGACC
GAAGAGGATGGGAACCCCGACCATGGCCTGCGGCCGCAGCTATCAGTCCT
CTCAGCTGACGCCCCTCACGAACCCTCGCACTCTCCCGAAATGCTCTTCG
GTGTCCATGGCGCATCATCTCAGCAGCATCCCATGTCAAACCATGGCTTT
GGGCCCACGGACTCTGTGGCCCTGCCGCAACATCACCATCACCATCGACT
CCCGCCCCATGCAGCGCTGCGCGCCCCAGGGCGTCATGGAGTGAATGTGG
AATCTCCTCCTTTGCCCTCGGGCCCGCCGAGTGTGGTGGGCCAGCCTGGA
ATGCCTGATCCAGCCCCCAGGCCTCGAGGACCAAAACTGAAGTTTACTCC
CGAAGAGGACGCTCTACTGGTGGAGTTGAAGGAAAACAAGAACTTGACGT
GGAAGCAAATTGCAGACTTCTTCCCGGGCCGAACGAGCGGTACCTTGCAA
GTCCGATACTGCACCAAGCTGAAGGCTAAGGATGTAGCTTGGAGTGACGA
AATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_48460ATCC64974_48460Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48460-T1ATCC64974_48460-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48460-T1.cdsATCC64974_48460-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48460-T1.exon2ATCC64974_48460-T1.exon2Aspergillus niger N402exon
ATCC64974_48460-T1.exon1ATCC64974_48460-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1647888..1648949 -
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