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ATCC64974_48480-T1, ATCC64974_48480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48480-T1
Unique NameATCC64974_48480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1660696..1661519+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48480-T1 ID=ATCC64974_48480-T1|Name=ATCC64974_48480-T1|organism=Aspergillus niger N402|type=mRNA|length=824bp|location=Sequence derived from alignment at OGUI01000007.1:1660696..1661519+ (Aspergillus niger N402)
ATGGCGAACAACAGACTCCAATACGTGAGTATAATTGAATCTCTGAATAT
TAAATGAAATGGAATACTGATCTATTGTTCTTTTTCTCTGCAGCGCCGCC
GGAACCCGTACGTTTGAATTTTCCCTCTGTTTCTACCCCCATCGTGCCTT
TGTCACTCCCACCAAAATTTTTGTTATCGGTCGCTACAGTGCAATAACGA
TTTGTCCGATTTCGACGCGATGAACCGCTGCTTTGCTCTTGAAATTTTAT
ATACGCCGAGATATCTATGAATAGGGTATTGATGGATTTTGTTCTTCAGG
TACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGA
GCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTG
ACTGTGGCATCAAGCTCCCTGGTGTGAGTGCTCCCGAATGATTCATGTTG
AATGGTGGTGGTGTGTGAACGGGCTGCAGGATGGATGAAGGGTGGAGTGT
GTGTGCGTGGGCGATCGCTTCGACCAACGCACAAGGAAACGACAATATTC
AACACCACCACCACCATTCGCGATACAAAGGATAGGAAGGAAGAGCAAAA
AATGGCTGATGGTCATCTTTCCACCGATATAGGTCCCCGCCCTCCGCCCC
CGCGAGTACGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTA
CGGTGGTTCCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTT
TCCTGATTGAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAG
GAGAAGGCTGCCGGCAAGCGCTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1660696..1661519+

>ATCC64974_48480-T1 ID=ATCC64974_48480-T1|Name=ATCC64974_48480-T1|organism=Aspergillus niger N402|type=CDS|length=1416bp|location=Sequence derived from alignment at OGUI01000007.1:1660696..1661519+ (Aspergillus niger N402)
ATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACACGCG
GTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGTTACC
TTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGGCATC
AAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGATCTC
CCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGCGCTG
GTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCAGAAG
ATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCAAGCG
CTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACA
CGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGT
TACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGG
CATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGA
TCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGC
GCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCA
GAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCA
AGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTAC
AACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCT
CCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACT
GTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCT
CAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCG
CTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGG
AGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCC
GGCAAGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCC
GTACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTG
AGCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGT
GACTGTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTA
CGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTT
CCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATT
GAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGC
TGCCGGCAAGCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL34AATCC64974_48480Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48480-T1.exon1ATCC64974_48480-T1.exon1Aspergillus niger N402exon
ATCC64974_48480-T1.exon2ATCC64974_48480-T1.exon2Aspergillus niger N402exon
ATCC64974_48480-T1.exon3ATCC64974_48480-T1.exon3Aspergillus niger N402exon
ATCC64974_48480-T1.exon4ATCC64974_48480-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48480-T1.cdsATCC64974_48480-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48480-T1ATCC64974_48480-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018065
DBxrefInterPro:IPR038562
DBxrefInterPro:IPR008195
DBxrefPFAM:PF01199
Product60S ribosomal protein L34A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1660696..1661519 +
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