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ATCC64974_48490-T1, ATCC64974_48490-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48490-T1
Unique NameATCC64974_48490-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1668020..1669123-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48490-T1 ID=ATCC64974_48490-T1|Name=ATCC64974_48490-T1|organism=Aspergillus niger N402|type=mRNA|length=1104bp|location=Sequence derived from alignment at OGUI01000007.1:1668020..1669123- (Aspergillus niger N402)
ATGAGGCAACTTAAGCCCGAACTACGGCGCCTTGAGGACAGAAGAGCACC
ATCAGACTGGCTACGTGAGCCAGGATCCATCTCATCATGCTCGCATGAGT
CTACTTCTTATCGCACACCGTCGGGGATGTCACGGTCAGATGCTTGTGAA
ACGGCTTGTCCTACAGCGAGCTTGCCACCACCGTCACCGGCAATCTCGGC
GCTAACCTACCCTTCGCTGAAGCTGGAAACGCCGGACTCTCCCGACAGTA
TTGATGATAAACCGTATTCTAAGCTTATCGAAATGGCCCTCAAGACCAAT
CCGGAAATGAAGCTGTCCCTTCAAGGGATTTACAACTGGTTTGAACAAAA
CACAGCAAAGGGGAGAGATCTCAGCTCGAAAGGCTGGCAAAACAGTGTAC
GGCACAACTTGTCTATGAACGCAGTGAGTCCGCCTGATCTTCCTCCTTTC
CTTGCTTCATTATTGATCACTGGATACTAAGAACACATTACTATACTATA
GGGCTTTGAGGCAGTCCGGGAAGAACCGATACCCGGAAAGAAAGCTGTGA
ATTACTGGCGCTTAACGACTGAAGCCATCAAGAATGGCGTCCAATCCACC
ACCCGGTACAGGAAGCAGGCGAGTTACAGAAAAGCCTCGAGCTCGGATCC
ACCGGCGCCTCAACGCCAGCGATCCGGGGCCAAGGGAGGGAAAGCTACTA
AAATCAAGTCAAAAGTTCGTGGGCGGATGAGCGAGGACGAGTTGCCCAAA
GGCAGGTACCACCCACGAGTGACATCACGACCGCGACCGACGAAGAATGT
GTTCACTCATTACAATACGACAGCGGGAGCGTTGATGGGGATTACAGTCA
TGTCACCTTTCCATGTCTCCGGACTGACCACGTCGGGGACTCGCTTATCC
AACGAGCCATTCGATTTGGGGAGCGTTGTTGGCTGCGCAGATCCCGCTCC
ATGTCCTCCCCTTTTTTGCGACATGGCGGGACCAGGGCCCGACTGTGTTG
CGTTGGACTCAGGCTTTCTCGGCTGGGGAGCAGCCGTCCACTCGTTTCCT
ACTGGCTTGCTGGCTGGCCCCGGAATCTCCACGGATCTCCAGATGGGAGT
ATAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:1668020..1669123-

>ATCC64974_48490-T1 ID=ATCC64974_48490-T1|Name=ATCC64974_48490-T1|organism=Aspergillus niger N402|type=CDS|length=2052bp|location=Sequence derived from alignment at OGUI01000007.1:1668020..1669123- (Aspergillus niger N402)
GGCTTTGAGGCAGTCCGGGAAGAACCGATACCCGGAAAGAAAGCTGTGAA
TTACTGGCGCTTAACGACTGAAGCCATCAAGAATGGCGTCCAATCCACCA
CCCGGTACAGGAAGCAGGCGAGTTACAGAAAAGCCTCGAGCTCGGATCCA
CCGGCGCCTCAACGCCAGCGATCCGGGGCCAAGGGAGGGAAAGCTACTAA
AATCAAGTCAAAAGTTCGTGGGCGGATGAGCGAGGACGAGTTGCCCAAAG
GCAGGTACCACCCACGAGTGACATCACGACCGCGACCGACGAAGAATGTG
TTCACTCATTACAATACGACAGCGGGAGCGTTGATGGGGATTACAGTCAT
GTCACCTTTCCATGTCTCCGGACTGACCACGTCGGGGACTCGCTTATCCA
ACGAGCCATTCGATTTGGGGAGCGTTGTTGGCTGCGCAGATCCCGCTCCA
TGTCCTCCCCTTTTTTGCGACATGGCGGGACCAGGGCCCGACTGTGTTGC
GTTGGACTCAGGCTTTCTCGGCTGGGGAGCAGCCGTCCACTCGTTTCCTA
CTGGCTTGCTGGCTGGCCCCGGAATCTCCACGGATCTCCAGATGGGAGTA
TAGATGAGGCAACTTAAGCCCGAACTACGGCGCCTTGAGGACAGAAGAGC
ACCATCAGACTGGCTACGTGAGCCAGGATCCATCTCATCATGCTCGCATG
AGTCTACTTCTTATCGCACACCGTCGGGGATGTCACGGTCAGATGCTTGT
GAAACGGCTTGTCCTACAGCGAGCTTGCCACCACCGTCACCGGCAATCTC
GGCGCTAACCTACCCTTCGCTGAAGCTGGAAACGCCGGACTCTCCCGACA
GTATTGATGATAAACCGTATTCTAAGCTTATCGAAATGGCCCTCAAGACC
AATCCGGAAATGAAGCTGTCCCTTCAAGGGATTTACAACTGGTTTGAACA
AAACACAGCAAAGGGGAGAGATCTCAGCTCGAAAGGCTGGCAAAACAGTG
TACGGCACAACTTGTCTATGAACGCAGGCTTTGAGGCAGTCCGGGAAGAA
CCGATACCCGGAAAGAAAGCTGTGAATTACTGGCGCTTAACGACTGAAGC
CATCAAGAATGGCGTCCAATCCACCACCCGGTACAGGAAGCAGGCGAGTT
ACAGAAAAGCCTCGAGCTCGGATCCACCGGCGCCTCAACGCCAGCGATCC
GGGGCCAAGGGAGGGAAAGCTACTAAAATCAAGTCAAAAGTTCGTGGGCG
GATGAGCGAGGACGAGTTGCCCAAAGGCAGGTACCACCCACGAGTGACAT
CACGACCGCGACCGACGAAGAATGTGTTCACTCATTACAATACGACAGCG
GGAGCGTTGATGGGGATTACAGTCATGTCACCTTTCCATGTCTCCGGACT
GACCACGTCGGGGACTCGCTTATCCAACGAGCCATTCGATTTGGGGAGCG
TTGTTGGCTGCGCAGATCCCGCTCCATGTCCTCCCCTTTTTTGCGACATG
GCGGGACCAGGGCCCGACTGTGTTGCGTTGGACTCAGGCTTTCTCGGCTG
GGGAGCAGCCGTCCACTCGTTTCCTACTGGCTTGCTGGCTGGCCCCGGAA
TCTCCACGGATCTCCAGATGGGAGTATAGATGAGGCAACTTAAGCCCGAA
CTACGGCGCCTTGAGGACAGAAGAGCACCATCAGACTGGCTACGTGAGCC
AGGATCCATCTCATCATGCTCGCATGAGTCTACTTCTTATCGCACACCGT
CGGGGATGTCACGGTCAGATGCTTGTGAAACGGCTTGTCCTACAGCGAGC
TTGCCACCACCGTCACCGGCAATCTCGGCGCTAACCTACCCTTCGCTGAA
GCTGGAAACGCCGGACTCTCCCGACAGTATTGATGATAAACCGTATTCTA
AGCTTATCGAAATGGCCCTCAAGACCAATCCGGAAATGAAGCTGTCCCTT
CAAGGGATTTACAACTGGTTTGAACAAAACACAGCAAAGGGGAGAGATCT
CAGCTCGAAAGGCTGGCAAAACAGTGTACGGCACAACTTGTCTATGAACG
CA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_48490ATCC64974_48490Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48490-T1ATCC64974_48490-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48490-T1.cdsATCC64974_48490-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48490-T1.exon2ATCC64974_48490-T1.exon2Aspergillus niger N402exon
ATCC64974_48490-T1.exon1ATCC64974_48490-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR030456
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR001766
DBxrefPFAM:PF00250
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1668020..1669123 -
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