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ATCC64974_48620-T1, ATCC64974_48620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48620-T1
Unique NameATCC64974_48620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1710918..1713738+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48620-T1 ID=ATCC64974_48620-T1|Name=ATCC64974_48620-T1|organism=Aspergillus niger N402|type=mRNA|length=2821bp|location=Sequence derived from alignment at OGUI01000007.1:1710918..1713738+ (Aspergillus niger N402)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATTTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATCAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGGTAAGCTAGATCTACAATGTCTA
AGTGACGACGGACTAACAATTGGCAGTCGTTCTGTTGTGCTCTGTCCGAC
ACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCAA
TATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATCG
GCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCGG
GTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGAC
ATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGCG
ACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCAA
AACGGAAGGGTCTTTCGCTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1710918..1713738+

>ATCC64974_48620-T1 ID=ATCC64974_48620-T1|Name=ATCC64974_48620-T1|organism=Aspergillus niger N402|type=CDS|length=5544bp|location=Sequence derived from alignment at OGUI01000007.1:1710918..1713738+ (Aspergillus niger N402)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATTTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATCAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGTCGTTCTGTTGTGCTCTGTCCGA
CACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCA
ATATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATC
GGCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCG
GGTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGA
CATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGC
GACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCA
AAACGGAAGGGTCTTTCGCTGAATGCGGCGCCATGGCAGAGCTAGTGGTG
GCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTACAT
TCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTT
GACCTCTTCTAATATTCAAGCTCTCCCGTTGGACCTCGTTGACCGATTGC
GCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGATGTC
GGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGAC
GGAGGGGGACGAGGCCAAGGCCATCTACTGGCTGGTTCGGGGCGCTGTCT
CCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCGGGG
GCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAAC
CATCATCGCCCGCACTCGATGCTTACTGGTCGTGTTAACCAAGGAGGATT
TCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGCGAC
GAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTC
TGTACCATCGGTTGATTTTGTGAGTCCGGTCAGGAGAGGCTCGAAGAGAT
TGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGCAGA
AGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGC
TGATGGATCCTCCAGTGCGCTGGCGAACGGGCTGGTTAATGTCCGTTTAC
TTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTCCAT
TTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATAT
TATCAAGCAGGACTCCCAGGGTCGGGAGATTTATTTCATTGTCCGCGGGG
AGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCGTTG
CCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACA
GGGACAATACTTTGGTGAAGTTGTGAGCCTCTCCCTGGCACCACGCCGGA
CCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATCAGCGGT
GATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACA
GGTGGAAAGGACCGCCAAGGAGCGGCTTCAAGCAGCGTCTGATGGCGACG
TTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTGAGT
GTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCT
TCTAACCTTAACAGAGACTGAGTTAGACAGCACTCCGACTGCCAAAGGTC
TAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTCAGT
GTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCC
ATTGACGCCGGAGGAGGTTTCCGGGGAGCAACAGAGATCTTCACCCTCAT
CTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCCGGT
GAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCA
CGGGTATCTTCCCGATCGGGTCCTGTTGGTTATATTTCAGCATCTGGAGC
TTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAGATT
CTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAA
CCGGTGCGTCACGGATGACGTATTGGTGAAGATCATTTGCCCATTCGTAG
GTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACGGAC
GAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTG
GAAAATGAAGAGCGTTTGGGATGTCACCGCATCGGCTATTCTTGACATGG
CGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGAAAA
GTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCA
GCATAAGCCACACGACGAGTCGAAACCCGGGAAGGCGTCTATGAAGCCTA
CCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAGAAA
TTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACAT
CGCATCGCACGCTGCTTCCAGGATCGAGCAGATGGACCTTACCCGTTGCA
CTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTCACC
AATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGC
TATCGTGCATCTTACGAATGCAGCAAAGCAGCTGCGGGAGCTAGATTTGT
CGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTGCAA
TGTTCGCAACTGACCTACCTCAATATGTCTTTCTGTGGCTCCGCCATATC
AGACCCATCTCTGCGCTGCATCGGCCTGCACCTGTTACATCTTAAACGTC
TTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCGGTT
GCAGACGGCTGCAACCAACTGACATCCTTTGATGTCAGTCAGTGCAAGAA
CCTCCTCCCATGGATTGAAGGCGACGGACCCCGCAAATACGGGAAGAAGA
TATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_48620ATCC64974_48620Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48620-T1.exon1ATCC64974_48620-T1.exon1Aspergillus niger N402exon
ATCC64974_48620-T1.exon2ATCC64974_48620-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48620-T1.cdsATCC64974_48620-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48620-T1ATCC64974_48620-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018490
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR018488
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR000595
DBxrefInterPro:IPR006553
DBxrefInterPro:IPR001810
DBxrefPFAM:PF13516
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
DBxrefPFAM:PF00027
DBxrefPFAM:PF16643
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1710918..1713738 +
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