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ATCC64974_48700-T1, ATCC64974_48700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48700-T1
Unique NameATCC64974_48700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1734037..1734649+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48700-T1 ID=ATCC64974_48700-T1|Name=ATCC64974_48700-T1|organism=Aspergillus niger N402|type=mRNA|length=613bp|location=Sequence derived from alignment at OGUI01000007.1:1734037..1734649+ (Aspergillus niger N402)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGTAGGTGTCTTTAGCTCTTCATCAACGTGGGAATTCATTCTATGATTT
TGCTGGATATATTTCCATGCTCAATCTTGATAAAGTATACTGCTACTGAG
CATAAGATGAGATACTAAGTGGCTTTTGTCAGGGTTACGCGTTGATCGAA
TACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGATC
CAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGCCAC
CCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGTGGA
CGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGAGGA
GGCTAGAGACTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:1734037..1734649+

>ATCC64974_48700-T1 ID=ATCC64974_48700-T1|Name=ATCC64974_48700-T1|organism=Aspergillus niger N402|type=CDS|length=966bp|location=Sequence derived from alignment at OGUI01000007.1:1734037..1734649+ (Aspergillus niger N402)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGGTTACGCGTTGATCGAATACTCCACCCTCCCCGAAGCCTCGGAAGCC
ATCAAGGCTTTGAACGGATCCAAATTGCTGGACCAGACAATCCAGGTCGA
CTTCGCGTTTGTCCGGCCACCCCCATCAAACAAAGGAAAGAACGCTGGAC
AAAGAGGTGGCCGTGGTGGACGGGGACGCAGCAGGAGCCGGGATAGGAGT
CGCAGCCCTGGAGCGGAGGAGGCTAGAGACTAGATGTCTACAGAAATGGA
AGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGTCCCCGCGCAGTCGGGCA
ACAATACCTCTGATCCGAGAACGCAAGCGTCAGCTGTTGCAGTGCGCAGT
ATCGAAGGATGGATCATCATCGCGACCAATATTCATGAAGAGGCCTCTGA
GGAGGACGTGACGGATCTGTTTGCTGAATATGGAGAGATCAAGAACTTCA
ATTTGAACCTCGATCGCCGGACGGGTTATGTGAAGGGTTACGCGTTGATC
GAATACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGG
ATCCAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGC
CACCCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGT
GGACGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGA
GGAGGCTAGAGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_48700ATCC64974_48700Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48700-T1.exon1ATCC64974_48700-T1.exon1Aspergillus niger N402exon
ATCC64974_48700-T1.exon2ATCC64974_48700-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48700-T1.cdsATCC64974_48700-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48700-T1ATCC64974_48700-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR033744
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR008111
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1734037..1734649 +
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