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ATCC64974_48970-T1, ATCC64974_48970-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_48970-T1
Unique NameATCC64974_48970-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1836140..1836777-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_48970-T1 ID=ATCC64974_48970-T1|Name=ATCC64974_48970-T1|organism=Aspergillus niger N402|type=mRNA|length=638bp|location=Sequence derived from alignment at OGUI01000007.1:1836140..1836777- (Aspergillus niger N402)
ATGGAGAACGAGAAGGGAGAGATCGTCGATCTGTATGTATCCATTCCTTC
CAAAACCAAATAATGTTGAGTTTGTGTGTGGTGCGAGATGGAGATATGGA
TGCGATTCGGTGCTCGATATACGATGATATGATATGGCTTGGAGAGATAT
ATCGCGGATATGTGCTACGGCGGGGAACATTATTGTCGAATCGACGAGGA
CATGGTTTTTAAATCAGGATCTACGATATGGAAGAGACGGAATTGAAGAA
ATATACGGAGAAAGGACAGGAGAAGGAAAGAGGAGGAATACCGAACACCG
ATCGCATCGCATATCTCTATCATCATCATCATCCAACGTCTCAATACATG
CGCAATCGCCAAAAGGACAAGCCAAGGCAAATTGCTAATATTAAATTTAA
CAGCTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCA
ACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGC
CGCTACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGC
CCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCT
ACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:1836140..1836777-

>ATCC64974_48970-T1 ID=ATCC64974_48970-T1|Name=ATCC64974_48970-T1|organism=Aspergillus niger N402|type=CDS|length=534bp|location=Sequence derived from alignment at OGUI01000007.1:1836140..1836777- (Aspergillus niger N402)
CTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCAACG
ACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGCCGC
TACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGCCCG
TGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCTACG
TCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAAATGGAGAACGAGAAG
GGAGAGATCGTCGATCTCTACGTCCCCCGCAAGTGCAGCGCCACCAACCG
CATCATCAAGGCCAACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGG
TTGACGAGAACGGCCGCTACACCGGTGAGAACCACACCTACGCTCTGTGC
GGCTTCATCCGTGCCCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGC
CCAGCGTGACGGCTACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCT
AAATGGAGAACGAGAAGGGAGAGATCGTCGATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS21ATCC64974_48970Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48970-T1ATCC64974_48970-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48970-T1.cdsATCC64974_48970-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_48970-T1.exon2ATCC64974_48970-T1.exon2Aspergillus niger N402exon
ATCC64974_48970-T1.exon1ATCC64974_48970-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR018279
DBxrefInterPro:IPR038579
DBxrefInterPro:IPR001931
DBxrefPFAM:PF01249
Product40S ribosomal protein S21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1836140..1836777 -
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