You are here

Home

ATCC64974_49040-T1, ATCC64974_49040-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_49040-T1
Unique NameATCC64974_49040-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1854968..1856042-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_49040-T1 ID=ATCC64974_49040-T1|Name=ATCC64974_49040-T1|organism=Aspergillus niger N402|type=mRNA|length=1075bp|location=Sequence derived from alignment at OGUI01000007.1:1854968..1856042- (Aspergillus niger N402)
ATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACAAA
AGTAAAACCCAAACCCAAACCCACCATCATTGTCTTTCCCTATACTATAC
TGAGTATTCTCATACTAAGGATAATAATAATAATAATAATAATAATAATA
ATAGGGCCTCCACCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCC
AAATCCTCCTCGAAGAACTCAAAGACATCTACGGATTACGATGGACAACA
TCCCTAATCGACCTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGC
GTTTAATCCCAACGGTAAGCCATAATTCATCCCCTCTTCTTTCTTTTTTC
CTTGTGACCTACCTAGAACAAGTATGTAGATAAATACTGAACAAACAAAC
CCATACAGGAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACT
CAGACCCAATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTA
GAAACTTACGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCG
ATCCCAGCTCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGC
AGCAGGCGGGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCT
TGTAAGCACACACACCCTATTTCAGTTCTTGTGGTTCTATAGGAGATATC
TAATTTACTTATTGCTTTTGGGGAATAGACGCTGTTGAGAGATTTAAGGC
TGAGACGCTTCGGATTTACAGCGTGCTGGAATTGCATTTGTCCAATGGTT
TGGCTGGTGGTGGTGGTGGTGGTGGTGATGAGACTAGGGAGTACTTGGTG
GGCGAGGGACGAGGGAAATACAGCATCGCGGATATTAATGCGTATGCGTG
GGTGCGGGCGTGGAAGAGAATGACGATCACGGAGGAGGAGATGGATGGGT
TTCCGCTGCTGAGGAAGTGGATTGAGCGGATTGGGGAGAGGCCGGCGGTG
GTGAGGGGGGTTGGGGATGGGTATGATGAGGAGGTGCATCCTGAGTTACT
ACTTACTGCGAAGCAGGGTAGATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1854968..1856042-

>ATCC64974_49040-T1 ID=ATCC64974_49040-T1|Name=ATCC64974_49040-T1|organism=Aspergillus niger N402|type=CDS|length=3204bp|location=Sequence derived from alignment at OGUI01000007.1:1854968..1856042- (Aspergillus niger N402)
ACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCTG
GAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTGA
TGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATCG
CGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGATC
ACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGCG
GATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGATG
AGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGGAA
AAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAATC
CCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTACGA
CCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCTCC
TCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGGGG
TTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCACC
TCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCGAA
GAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGACCT
CGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAACG
ATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACAAA
AACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCT
GGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTG
ATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATC
GCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGAT
CACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGC
GGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGAT
GAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGGA
AAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAAT
CCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTACG
ACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCTC
CTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGGG
GTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCAC
CTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCGA
AGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGACC
TCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAAC
GATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACAA
AAACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGC
TGGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGT
GATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCAT
CGCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGA
TCACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAG
CGGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATGA
TGAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAGG
AAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCAA
TCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTAC
GACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGCT
CCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCGG
GGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCCA
CCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCG
AAGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGAC
CTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAA
CGATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACACA
AAAACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTG
CTGGAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGG
TGATGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCA
TCGCGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACG
ATCACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGA
GCGGATTGGGGAGAGGCCGGCGGTGGTGAGGGGGGTTGGGGATGGGTATG
ATGAGGAGGTGCATCCTGAGTTACTACTTACTGCGAAGCAGGGTAGATAG
GAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCA
ATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTA
CGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGC
TCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCG
GGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGGCCTCC
ACCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTC
GAAGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGA
CCTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCA
ACGATGGCAAGCCTATTCACAGAAACAACCCCATCAAGAATCAAAGACAC
AAAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_49040ATCC64974_49040Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49040-T1ATCC64974_49040-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49040-T1.cdsATCC64974_49040-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49040-T1.exon4ATCC64974_49040-T1.exon4Aspergillus niger N402exon
ATCC64974_49040-T1.exon3ATCC64974_49040-T1.exon3Aspergillus niger N402exon
ATCC64974_49040-T1.exon2ATCC64974_49040-T1.exon2Aspergillus niger N402exon
ATCC64974_49040-T1.exon1ATCC64974_49040-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1854968..1856042 -
Powered by Drupal