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ATCC64974_49740-T1, ATCC64974_49740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_49740-T1
Unique NameATCC64974_49740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2127523..2128210-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_49740-T1 ID=ATCC64974_49740-T1|Name=ATCC64974_49740-T1|organism=Aspergillus niger N402|type=mRNA|length=688bp|location=Sequence derived from alignment at OGUI01000007.1:2127523..2128210- (Aspergillus niger N402)
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGTATGATCTGGCTCTATCCTCCCTCTTGTCTCGCCGATTTCTGTCGTGT
GCGTGGACGAGCTCTTGTGAGCCGCATGGGAGCTCGCCATGGATTGCGAC
AGCGTGATGGAACCCAACCAGCTAACGAACCCGGTTCGCTCCCGCAGTGA
CTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTC
CCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGC
TACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAA
GAAGTAATGCTGTCTTTTCCAGCTCCGCCATGCTGCAGCCCAACTAACAC
AACCGCCCTTTCTGCAGGATCTACGAGAACCAGCACCTCCTGGATGCGAC
CGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGGTTAGACTGCACTGTC
CCAATCCCGCTACCAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATC
TTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACA
GCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2127523..2128210-

>ATCC64974_49740-T1 ID=ATCC64974_49740-T1|Name=ATCC64974_49740-T1|organism=Aspergillus niger N402|type=CDS|length=1668bp|location=Sequence derived from alignment at OGUI01000007.1:2127523..2128210- (Aspergillus niger N402)
GAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCT
CTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTAC
GAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACGT
CCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAAC
GCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTT
CATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGG
CGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGG
TGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATG
TACAGCGATCTGGAATGGAATCTTTCATCAAGCTGGGCTTCCACCTCCTG
ATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATCCGCGACGA
GTCTCACTGAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATC
TTCCGCAAGCTGAACGTCCACAAGAAGTGACTACATCAACCCCATTGATC
TGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCGTTCACGCT
TTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCCATCGTCCT
GAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTG
GCTCTATCTGCTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTGCAGG
TCTTCTTTACTATCATGTACAGCGATCTGGAATGGAATCTTTCATCAAGC
TGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTC
GCCTTGATCCGCGACGAGTCTCACTGAGATCTACGAGAACCAGCACCTCC
TGGATGCGACCGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGTGACTA
CATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCG
AAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTAC
TGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAA
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACC
TCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTA
CGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACG
TCCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAA
CGCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGT
TCATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTG
GCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCG
GTGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCAT
GTACAGCGATCTGGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV14ATCC64974_49740Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49740-T1ATCC64974_49740-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49740-T1.cdsATCC64974_49740-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49740-T1.exon4ATCC64974_49740-T1.exon4Aspergillus niger N402exon
ATCC64974_49740-T1.exon3ATCC64974_49740-T1.exon3Aspergillus niger N402exon
ATCC64974_49740-T1.exon2ATCC64974_49740-T1.exon2Aspergillus niger N402exon
ATCC64974_49740-T1.exon1ATCC64974_49740-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR033466
DBxrefInterPro:IPR003377
DBxrefPFAM:PF03311
ProductCOPII-coated vesicle protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2127523..2128210 -
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