You are here

Home

ATCC64974_49860-T1, ATCC64974_49860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_49860-T1
Unique NameATCC64974_49860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2156781..2158339+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_49860-T1 ID=ATCC64974_49860-T1|Name=ATCC64974_49860-T1|organism=Aspergillus niger N402|type=mRNA|length=1559bp|location=Sequence derived from alignment at OGUI01000007.1:2156781..2158339+ (Aspergillus niger N402)
ATGGCCTGCTCATCGCAATCTGTCACCATTGAGTCCTATCCTGAGGCGGC
GGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTTAGAG
ATCGTCGTCGCAGACACTCTTTTCACACAGCTCGCAAGTTGTCCTGCGAC
TACGATGCGGACGCTGTATTCCTACGGGTACGCTGCATTCTCATCTTCAC
CACCAATTCCGTCCCTGACTGACCTCTCCGTAGGTGGAGCTCTTCCTGGC
CGAACTCGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACA
TGGATCAGATCGACGCCAGTCTCCGCCGTGGATACGCCACCCTGGAAGCC
GTGCGAGATTCCTGCTCCCATGCCTCCGGGGAGCTGATGGGTGGTGGGAA
AAAGCGGGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATG
CACTCGCAACAAAGGAGACGCTCGAACAAAAGGCCCAGGCGGGAGTCCGA
CTGATGGAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCGGTCCG
CGACCGGGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACT
CGAAGCTGGTGCATGCCCGTGAGGTGGTCGACGAGGGTATGGAACGGGCA
CGACGGGCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATCCTGCT
GGCCCAGGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGC
GGGTGAACCCGCATATTCTGCAGGGGTATCGGTTCACACACTCCAAGGTG
GAATGCTTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAACATCTG
GTCCCACCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTT
ATCCGCTGAACCCCAACTTCCACCTCAGCTCGCGGACGGACATTCTGGTG
GCCGCCGTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGCACACT
GTGGCACACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTG
CCTGTGTGGACTACACGGGCATCTCGATGCTGGTGGCAGCCTCGATTGTG
ACGACCGAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGGACTTA
TATTTTGCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGC
ACCCAACCTTTAACCGGGCGGATATGGCATGGGCGCGCGTGGCTTTTTAC
GTGTCGCTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACGTACAC
GCGTGGACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCA
TCATGGTGTACTTCGTGGGAGCGTGTGTTTATGCGTCGCAGGTGCCGGAG
CGGTGGCGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAACATCTG
GCATCTGGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGG
ATCTGTTCGCGGGAGCATTCCAACGGGCGCAGGGCGAATGCCCGAACCTG
GCCAAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2156781..2158339+

>ATCC64974_49860-T1 ID=ATCC64974_49860-T1|Name=ATCC64974_49860-T1|organism=Aspergillus niger N402|type=CDS|length=3006bp|location=Sequence derived from alignment at OGUI01000007.1:2156781..2158339+ (Aspergillus niger N402)
ATGGCCTGCTCATCGCAATCTGTCACCATTGAGTCCTATCCTGAGGCGGC
GGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTTAGAG
ATCGTCGTCGCAGACACTCTTTTCACACAGCTCGCAAGTTGTCCTGCGAC
TACGATGCGGACGCTGTATTCCTACGGGTGGAGCTCTTCCTGGCCGAACT
CGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACATGGATC
AGATCGACGCCAGTCTCCGCCGTGGATACGCCACCCTGGAAGCCGTGCGA
GATTCCTGCTCCCATGCCTCCGGGGAGCTGATGGGTGGTGGGAAAAAGCG
GGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATGCACTCG
CAACAAAGGAGACGCTCGAACAAAAGGCCCAGGCGGGAGTCCGACTGATG
GAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCGGTCCGCGACCG
GGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACTCGAAGC
TGGTGCATGCCCGTGAGGTGGTCGACGAGGGTATGGAACGGGCACGACGG
GCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATCCTGCTGGCCCA
GGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGCGGGTGA
ACCCGCATATTCTGCAGGGGTATCGGTTCACACACTCCAAGGTGGAATGC
TTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAACATCTGGTCCCA
CCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTTATCCGC
TGAACCCCAACTTCCACCTCAGCTCGCGGACGGACATTCTGGTGGCCGCC
GTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGCACACTGTGGCA
CACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTGCCTGTG
TGGACTACACGGGCATCTCGATGCTGGTGGCAGCCTCGATTGTGACGACC
GAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGGACTTATATTTT
GCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGCACCCAA
CCTTTAACCGGGCGGATATGGCATGGGCGCGCGTGGCTTTTTACGTGTCG
CTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACGTACACGCGTGG
ACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCATCATGG
TGTACTTCGTGGGAGCGTGTGTTTATGCGTCGCAGGTGCCGGAGCGGTGG
CGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAACATCTGGCATCT
GGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGGATCTGT
TCGCGGGAGCATTCCAACGGGCGCAGGGCGAATGCCCGAACCTGGCCAAG
TAGATGGCCTGCTCATCGCAATCTGTCACCATTGAGTCCTATCCTGAGGC
GGCGGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTTA
GAGATCGTCGTCGCAGACACTCTTTTCACACAGCTCGCAAGTTGTCCTGC
GACTACGATGCGGACGCTGTATTCCTACGGGTGGAGCTCTTCCTGGCCGA
ACTCGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACATGG
ATCAGATCGACGCCAGTCTCCGCCGTGGATACGCCACCCTGGAAGCCGTG
CGAGATTCCTGCTCCCATGCCTCCGGGGAGCTGATGGGTGGTGGGAAAAA
GCGGGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATGCAC
TCGCAACAAAGGAGACGCTCGAACAAAAGGCCCAGGCGGGAGTCCGACTG
ATGGAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCGGTCCGCGA
CCGGGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACTCGA
AGCTGGTGCATGCCCGTGAGGTGGTCGACGAGGGTATGGAACGGGCACGA
CGGGCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATCCTGCTGGC
CCAGGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGCGGG
TGAACCCGCATATTCTGCAGGGGTATCGGTTCACACACTCCAAGGTGGAA
TGCTTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAACATCTGGTC
CCACCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTTATC
CGCTGAACCCCAACTTCCACCTCAGCTCGCGGACGGACATTCTGGTGGCC
GCCGTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGCACACTGTG
GCACACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTGCCT
GTGTGGACTACACGGGCATCTCGATGCTGGTGGCAGCCTCGATTGTGACG
ACCGAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGGACTTATAT
TTTGCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGCACC
CAACCTTTAACCGGGCGGATATGGCATGGGCGCGCGTGGCTTTTTACGTG
TCGCTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACGTACACGCG
TGGACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCATCA
TGGTGTACTTCGTGGGAGCGTGTGTTTATGCGTCGCAGGTGCCGGAGCGG
TGGCGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAACATCTGGCA
TCTGGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGGATC
TGTTCGCGGGAGCATTCCAACGGGCGCAGGGCGAATGCCCGAACCTGGCC
AAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_49860ATCC64974_49860Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49860-T1.exon1ATCC64974_49860-T1.exon1Aspergillus niger N402exon
ATCC64974_49860-T1.exon2ATCC64974_49860-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49860-T1.cdsATCC64974_49860-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_49860-T1ATCC64974_49860-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004254
DBxrefPFAM:PF03006
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2156781..2158339 +
Powered by Drupal