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ATCC64974_50-T1, ATCC64974_50-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50-T1
Unique NameATCC64974_50-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:62075..63107+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50-T1 ID=ATCC64974_50-T1|Name=ATCC64974_50-T1|organism=Aspergillus niger N402|type=mRNA|length=1033bp|location=Sequence derived from alignment at OGUI01000001.1:62075..63107+ (Aspergillus niger N402)
ATGCCAGAAAGATACACTCGGGGTCGCTCTCGTGCCCGTTTGCCATCCTA
TTCGGAATTTGATCGGGCCCCGTCCTTGCAGCGTTCTTTGTCTCCTCACT
CAGAATCAAGATTCAACACTACACCTCGAACTCGTTCTGTGGAGCGTGGC
GCTGTCCGTCGCAATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTC
GCACAACCAAGCACCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGAC
GTTACAGGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCT
TCAAGAAGCTCAAAGGTCGGTTGAGCTCCCATTGAACCAGGTTTTAATGC
TGAAACTAATGGAAATCAAAGATAGTTATCGAAAAGTTGACTAAAAATGT
CACCGAATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAA
GTCTTGATCTCCCTATGAATAAAGCTTGTAAACTCTCTAGACTTATGCTC
TCCTAGGTGCCTAGGCTGACGCCTCACTAGTCATGACAAACAGGGGCACC
GCATACATACTTTACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCA
TATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTC
TTCCTAGGAGAGCCTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGA
GGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCG
CGCTCCAAGGTCGCCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATA
TGGAAAGGCATGACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCG
CCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACC
GCCAAGACGGACACATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCC
GTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGAC
CGGAGTATGAGTCCAAGAAGAGACCATCATTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:62075..63107+

>ATCC64974_50-T1 ID=ATCC64974_50-T1|Name=ATCC64974_50-T1|organism=Aspergillus niger N402|type=CDS|length=2772bp|location=Sequence derived from alignment at OGUI01000001.1:62075..63107+ (Aspergillus niger N402)
ATGCCAGAAAGATACACTCGGGGTCGCTCTCGTGCCCGTTTGCCATCCTA
TTCGGAATTTGATCGGGCCCCGTCCTTGCAGCGTTCTTTGTCTCCTCACT
CAGAATCAAGATTCAACACTACACCTCGAACTCGTTCTGTGGAGCGTGGC
GCTGTCCGTCGCAATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTC
GCACAACCAAGCACCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGAC
GTTACAGGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCT
TCAAGAAGCTCAAAGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGA
ATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTG
ATCTCCCTATGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATA
CTTTACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGA
GGCTCAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGA
GAGCCTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTT
GGCCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAG
GTCGCCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGC
ATGACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGT
TCTCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACG
GACACATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGA
GCTACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATG
AGTCCAAGAAGAGACCATCATTGAATGCCAGAAAGATACACTCGGGGTCG
CTCTCGTGCCCGTTTGCCATCCTATTCGGAATTTGATCGGGCCCCGTCCT
TGCAGCGTTCTTTGTCTCCTCACTCAGAATCAAGATTCAACACTACACCT
CGAACTCGTTCTGTGGAGCGTGGCGCTGTCCGTCGCAATGCTCACCGTTC
CAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCACCATCCCGTAGTC
GAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAAAGACTACAGCCGG
ACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAAAGATAGTTATCGA
AAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTG
GTTTTGGCGACATACAAAGTCTTGATCTCCCTATGAATAAAGCTTTCATG
ACAAACAGGGGCACCGCATACATACTTTACCACGATCCTGCGGATGCAGA
GGCGGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGA
ACGTGTCGATTGTTCTTCCTAGGAGAGCCTTCTCTCGCTCACCACCACCA
GTTCAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACC
TCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCGCTAGGAGGTATC
GCCGTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTCTCTG
TCGCGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCT
CTCAAACTCCCCACCGCCAAGACGGACACATTCGCGTATGGACAGCTCTC
AGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGT
CGCAGTGATAGGGACCGGAGTATGAGTCCAAGAAGAGACCATCATTGAAT
GCCAGAAAGATACACTCGGGGTCGCTCTCGTGCCCGTTTGCCATCCTATT
CGGAATTTGATCGGGCCCCGTCCTTGCAGCGTTCTTTGTCTCCTCACTCA
GAATCAAGATTCAACACTACACCTCGAACTCGTTCTGTGGAGCGTGGCGC
TGTCCGTCGCAATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGC
ACAACCAAGCACCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGT
TACAGGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTC
AAGAAGCTCAAAGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAAT
CACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTGAT
CTCCCTATGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATACT
TTACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGG
CTCAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGAGA
GCCTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTTGG
CCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGT
CGCCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCAT
GACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTC
TCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGA
CACATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGC
TACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGAG
TCCAAGAAGAGACCATCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_50ATCC64974_50Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50-T1.exon1ATCC64974_50-T1.exon1Aspergillus niger N402exon
ATCC64974_50-T1.exon2ATCC64974_50-T1.exon2Aspergillus niger N402exon
ATCC64974_50-T1.exon3ATCC64974_50-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50-T1.cdsATCC64974_50-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50-T1ATCC64974_50-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034201
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:62075..63107 +
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