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ATCC64974_50240-T1, ATCC64974_50240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50240-T1
Unique NameATCC64974_50240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2280915..2282310-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50240-T1 ID=ATCC64974_50240-T1|Name=ATCC64974_50240-T1|organism=Aspergillus niger N402|type=mRNA|length=1396bp|location=Sequence derived from alignment at OGUI01000007.1:2280915..2282310- (Aspergillus niger N402)
ATGAACGACACCACGACCACCCCTTCTCCCACTCCGGGTCCCGCCACGAA
AGCATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGGAACGAAGCGCA
AGCGCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTGGCTATCAGCCC
GGTGTTTACTATGATTGGCATGATTGTCTGACCCAGGTCACCGGGTACAA
GGGAGCTGTCTGTAAGGTGACCCGCGGATAGGCCGCATCCTGTCTTCTGA
AGCTGACCTATTCTTTCAGTCCAGGCCTTCCCTTCTTACGAAGAAGCAAA
TGCCTTCCTTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCT
TGGATTCCGAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGAATACCT
GGTGTTTATACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGGATTTCC
CAAACCGCGTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGGAGTTTG
CAAGGGAAGGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCGGAATCG
CAGAAGCTCGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGCGGATGC
GCAGGGTATACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCGGAGCGG
AGGATGGGTTTGACCCCAACGTATTGTTGGATCCCAAAACAGGGAAAGTG
GTCTATAAATCACAGGACCAGAAGACCGCGACCAAGATGAAATCCACTGG
TCCACCGGGGATGCTGCGCATCTACACGGACGGTAGTTCTTTGAAAAATG
GCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCTGGCGAC
TCACGGTTTGTCCCACCCCCCCCCTGACACTCACCTTAGCGTTGTCGTGT
GTTCTTTATTCCCTGGGAGGGTTTGCCTTTGGCCTATACTGACGCCTGTT
CTCCCAGCAGAAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAGACCAAT
CAGCGTGCCGAGCTGACGGCCATCCTCCGGGCGCTTGACATAGCTCCACG
ACACCGGGACGTGACCATATTTACAGATAGCCAATACGCGATCAACTGTG
TGACGGTGTGGTTTACAAAGTGGCGGCGCAACAACTGGATGACCGCTGGC
AACAAGCCGGTGGACAACAAGGACTTGGTTGAATCCATTTTGTCGAAGAT
CGAAGAACGCAATGAGCTGAAGGTGAAGACCTTGTTCGAATGGGTCAAGG
GACATAGCTCCCACCCTGGGAATGAGGCCGCCGATCGTCTGGCGGTGAGT
GGTGCTCGACGAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGCAGTCAG
AGACATTCCGGACGAGGCTTTTGAGGATGATGACGACGACTTCTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2280915..2282310-

>ATCC64974_50240-T1 ID=ATCC64974_50240-T1|Name=ATCC64974_50240-T1|organism=Aspergillus niger N402|type=CDS|length=3708bp|location=Sequence derived from alignment at OGUI01000007.1:2280915..2282310- (Aspergillus niger N402)
CAGAAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAGACCAATCAGCGTG
CCGAGCTGACGGCCATCCTCCGGGCGCTTGACATAGCTCCACGACACCGG
GACGTGACCATATTTACAGATAGCCAATACGCGATCAACTGTGTGACGGT
GTGGTTTACAAAGTGGCGGCGCAACAACTGGATGACCGCTGGCAACAAGC
CGGTGGACAACAAGGACTTGGTTGAATCCATTTTGTCGAAGATCGAAGAA
CGCAATGAGCTGAAGGTGAAGACCTTGTTCGAATGGGTCAAGGGACATAG
CTCCCACCCTGGGAATGAGGCCGCCGATCGTCTGGCGGTGAGTGGTGCTC
GACGAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGCAGTCAGAGACATT
CCGGACGAGGCTTTTGAGGATGATGACGACGACTTCTGATCCAGGCCTTC
CCTTCTTACGAAGAAGCAAATGCCTTCCTTACCGGGACTCGTGTCCCCGC
TGCGCGCGGCGGGACCCCCTTGGATTCCGAACCCACGAGATTCTACGGTG
TCCAGCGTGGTCGAATACCTGGTGTTTATACGGACTGGGCAAAGGCGCAG
GAGCAGATCAAAGGATTTCCCAAACCGCGTTACAAGAAATTTTCGACAAG
GGAGGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGGTCTGGCACTACGT
TCGGAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGCACCGGGACTGATG
AACGGGGTCCCTGCGGATGCGCAGGGTATACCTTTTGAGGCGGGGAATGG
CCCTCTGCCGACCGGAGCGGAGGATGGGTTTGACCCCAACGTATTGTTGG
ATCCCAAAACAGGGAAAGTGGTCTATAAATCACAGGACCAGAAGACCGCG
ACCAAGATGAAATCCACTGGTCCACCGGGGATGCTGCGCATCTACACGGA
CGGTAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCAGCGGGTGTCGGGG
TTTACTTTGGACCTGGCGACTCACGATGAACGACACCACGACCACCCCTT
CTCCCACTCCGGGTCCCGCCACGAAAGCATCTCCGACTTCGAAATCTCCC
TCAGCCGTAGCCGGAACGAAGCGCAAGCGCGCATCAGCGGCGAAATACTA
CGCCGTGAAGGCTGGCTATCAGCCCGGTGTTTACTATGATTGGCATGATT
GTCTGACCCAGGTCACCGGGTACAAGGGAGCTGTCTCAGAAATGTTTCAG
AGCCCCTCAAAGGTAGTCGCCAGACCAATCAGCGTGCCGAGCTGACGGCC
ATCCTCCGGGCGCTTGACATAGCTCCACGACACCGGGACGTGACCATATT
TACAGATAGCCAATACGCGATCAACTGTGTGACGGTGTGGTTTACAAAGT
GGCGGCGCAACAACTGGATGACCGCTGGCAACAAGCCGGTGGACAACAAG
GACTTGGTTGAATCCATTTTGTCGAAGATCGAAGAACGCAATGAGCTGAA
GGTGAAGACCTTGTTCGAATGGGTCAAGGGACATAGCTCCCACCCTGGGA
ATGAGGCCGCCGATCGTCTGGCGGTGAGTGGTGCTCGACGAGGAGTTTCG
GAGAAGGCTGCAGCATTGGAAGCAGTCAGAGACATTCCGGACGAGGCTTT
TGAGGATGATGACGACGACTTCTGATCCAGGCCTTCCCTTCTTACGAAGA
AGCAAATGCCTTCCTTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGA
CCCCCTTGGATTCCGAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGA
ATACCTGGTGTTTATACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGG
ATTTCCCAAACCGCGTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGG
AGTTTGCAAGGGAAGGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCG
GAATCGCAGAAGCTCGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGC
GGATGCGCAGGGTATACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCG
GAGCGGAGGATGGGTTTGACCCCAACGTATTGTTGGATCCCAAAACAGGG
AAAGTGGTCTATAAATCACAGGACCAGAAGACCGCGACCAAGATGAAATC
CACTGGTCCACCGGGGATGCTGCGCATCTACACGGACGGTAGTTCTTTGA
AAAATGGCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCT
GGCGACTCACGATGAACGACACCACGACCACCCCTTCTCCCACTCCGGGT
CCCGCCACGAAAGCATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGG
AACGAAGCGCAAGCGCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTG
GCTATCAGCCCGGTGTTTACTATGATTGGCATGATTGTCTGACCCAGGTC
ACCGGGTACAAGGGAGCTGTCTCAGAAATGTTTCAGAGCCCCTCAAAGGT
AGTCGCCAGACCAATCAGCGTGCCGAGCTGACGGCCATCCTCCGGGCGCT
TGACATAGCTCCACGACACCGGGACGTGACCATATTTACAGATAGCCAAT
ACGCGATCAACTGTGTGACGGTGTGGTTTACAAAGTGGCGGCGCAACAAC
TGGATGACCGCTGGCAACAAGCCGGTGGACAACAAGGACTTGGTTGAATC
CATTTTGTCGAAGATCGAAGAACGCAATGAGCTGAAGGTGAAGACCTTGT
TCGAATGGGTCAAGGGACATAGCTCCCACCCTGGGAATGAGGCCGCCGAT
CGTCTGGCGGTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAGGCTGCAGC
ATTGGAAGCAGTCAGAGACATTCCGGACGAGGCTTTTGAGGATGATGACG
ACGACTTCTGATCCAGGCCTTCCCTTCTTACGAAGAAGCAAATGCCTTCC
TTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCTTGGATTCC
GAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGAATACCTGGTGTTTA
TACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGGATTTCCCAAACCGC
GTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGGAGTTTGCAAGGGAA
GGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCGGAATCGCAGAAGCT
CGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGCGGATGCGCAGGGTA
TACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCGGAGCGGAGGATGGG
TTTGACCCCAACGTATTGTTGGATCCCAAAACAGGGAAAGTGGTCTATAA
ATCACAGGACCAGAAGACCGCGACCAAGATGAAATCCACTGGTCCACCGG
GGATGCTGCGCATCTACACGGACGGTAGTTCTTTGAAAAATGGCAAAGCG
CTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCTGGCGACTCACGATG
AACGACACCACGACCACCCCTTCTCCCACTCCGGGTCCCGCCACGAAAGC
ATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGGAACGAAGCGCAAGC
GCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTGGCTATCAGCCCGGT
GTTTACTATGATTGGCATGATTGTCTGACCCAGGTCACCGGGTACAAGGG
AGCTGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_50240ATCC64974_50240Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50240-T1ATCC64974_50240-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50240-T1.cdsATCC64974_50240-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50240-T1.exon3ATCC64974_50240-T1.exon3Aspergillus niger N402exon
ATCC64974_50240-T1.exon2ATCC64974_50240-T1.exon2Aspergillus niger N402exon
ATCC64974_50240-T1.exon1ATCC64974_50240-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR009027
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR002156
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR037056
DBxrefInterPro:IPR011320
DBxrefPFAM:PF00075
DBxrefPFAM:PF01693
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2280915..2282310 -
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