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ATCC64974_50520-T1, ATCC64974_50520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50520-T1
Unique NameATCC64974_50520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2356948..2358227-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50520-T1 ID=ATCC64974_50520-T1|Name=ATCC64974_50520-T1|organism=Aspergillus niger N402|type=mRNA|length=1280bp|location=Sequence derived from alignment at OGUI01000007.1:2356948..2358227- (Aspergillus niger N402)
ATGTCTCCCGCTATGGCCCAAGCCGGTGCCGGCTCTGCCGCTAAGGATGT
TAAGAGAGAATCCGCGACTGCTCGTCTTCTGGGTTCCGGTATGTGTCACC
CGTTTTGTGTCCAGGTCCTGGATTGCACTCAATATTTAACTTTCGTTCTC
AGGAACCGCCGGAATTGCGGAGCTGATGGTCTTCCACCCTGTACGATTAC
ATCCTACCCTCTCGAATATTTGCGCACCGATTGCGCTCTCTCGGCGGGAG
AAATGTGAAACTGACTCATCGACCAGGTTGATACCATCTCCAAGCGCTTG
ATGAGCAACCAGACCCGGGTACGATTCTTCCTATCCCTTATCCGTACGAG
ACTATGGAAATGCATTGGACTAATTGTGCGCTGGCTTAGATCACCTCCAC
CGCTGGTCTGAACCAGGTTGTTTTCAAGGAATACGCCAACGCCTCTTTCG
GCGGCAAGTTCACCTCTCTCTTCCCCGGTCTGGGTTACGCCGCCGGGTAC
AAGGTTCTCCAGCGTATCTACAAGTACGGTGGTCAGCCTTTCGCTCGCGA
CTACCTCGCCCAGCACTGGGGTTCCGACTTTGACAATGCTTTTGGCAAGG
GTACCGGCAAGGCGATCATGCACGCCACTGCTGGAAGGTTCGTTTCGTGT
TCCGGCCATTGATGGTAATGCTCTGGCTAATCATATGGAAATAGTTTGAT
CGGTATCGGAGAGATCGTCCTTCTGCCCCTGGACGTCCTCAAGATCAAGC
GTCAGACTAACCCCGAGGCTTTCCGTGGCCGTGGTCTGTTCAAGATCATC
TCCGATGAGGGTATGGGTCTCTACCGTGGTGCTGGTTGGACTGCCGCCCG
TAACGCTCCCGGATCTTTCGCTGTATGTTCCCATGGTTCCGATATTTGCC
TTCTTTGCCATGTGTGGGTGTCCGATACTAATGCCTGGAAATAGCTCTTC
GGTGGTTCCGCTTTCGCCAAGGAGTACATCTACAACCTGAAGGACTACAA
CACTGCTTCCTGGAGCCAGAACTTTGTTGCCTCCATCTGCGGTGCCAGTG
CCTCCCTGGTCGTGTCAGCTCCTCTGGATGTGATCAAGACCCGTATCCAG
AACCGCAACTTCGAGAACCCCGAGTCCGGCTTCCGCATTCTGTCTAACAT
GGTCAAGAACGAGGGTGTCACCAGTTTCTTCAAGGGTCTGACGCCCAAGC
TCCTGATGACCGGACCCAAGCTCGTTTTCAGCTTCTGGCTGGCTCAGACG
TTGATCCCCGCCTTTGGCCAGGTCGTTTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2356948..2358227-

>ATCC64974_50520-T1 ID=ATCC64974_50520-T1|Name=ATCC64974_50520-T1|organism=Aspergillus niger N402|type=CDS|length=5580bp|location=Sequence derived from alignment at OGUI01000007.1:2356948..2358227- (Aspergillus niger N402)
CTCTTCGGTGGTTCCGCTTTCGCCAAGGAGTACATCTACAACCTGAAGGA
CTACAACACTGCTTCCTGGAGCCAGAACTTTGTTGCCTCCATCTGCGGTG
CCAGTGCCTCCCTGGTCGTGTCAGCTCCTCTGGATGTGATCAAGACCCGT
ATCCAGAACCGCAACTTCGAGAACCCCGAGTCCGGCTTCCGCATTCTGTC
TAACATGGTCAAGAACGAGGGTGTCACCAGTTTCTTCAAGGGTCTGACGC
CCAAGCTCCTGATGACCGGACCCAAGCTCGTTTTCAGCTTCTGGCTGGCT
CAGACGTTGATCCCCGCCTTTGGCCAGGTCGTTTAATTTGATCGGTATCG
GAGAGATCGTCCTTCTGCCCCTGGACGTCCTCAAGATCAAGCGTCAGACT
AACCCCGAGGCTTTCCGTGGCCGTGGTCTGTTCAAGATCATCTCCGATGA
GGGTATGGGTCTCTACCGTGGTGCTGGTTGGACTGCCGCCCGTAACGCTC
CCGGATCTTTCGCTATCACCTCCACCGCTGGTCTGAACCAGGTTGTTTTC
AAGGAATACGCCAACGCCTCTTTCGGCGGCAAGTTCACCTCTCTCTTCCC
CGGTCTGGGTTACGCCGCCGGGTACAAGGTTCTCCAGCGTATCTACAAGT
ACGGTGGTCAGCCTTTCGCTCGCGACTACCTCGCCCAGCACTGGGGTTCC
GACTTTGACAATGCTTTTGGCAAGGGTACCGGCAAGGCGATCATGCACGC
CACTGCTGGAAGGTTGATACCATCTCCAAGCGCTTGATGAGCAACCAGAC
CCGGGAACCGCCGGAATTGCGGAGCTGATGGTCTTCCACCCTATGTCTCC
CGCTATGGCCCAAGCCGGTGCCGGCTCTGCCGCTAAGGATGTTAAGAGAG
AATCCGCGACTGCTCGTCTTCTGGGTTCCGCTCTTCGGTGGTTCCGCTTT
CGCCAAGGAGTACATCTACAACCTGAAGGACTACAACACTGCTTCCTGGA
GCCAGAACTTTGTTGCCTCCATCTGCGGTGCCAGTGCCTCCCTGGTCGTG
TCAGCTCCTCTGGATGTGATCAAGACCCGTATCCAGAACCGCAACTTCGA
GAACCCCGAGTCCGGCTTCCGCATTCTGTCTAACATGGTCAAGAACGAGG
GTGTCACCAGTTTCTTCAAGGGTCTGACGCCCAAGCTCCTGATGACCGGA
CCCAAGCTCGTTTTCAGCTTCTGGCTGGCTCAGACGTTGATCCCCGCCTT
TGGCCAGGTCGTTTAATTTGATCGGTATCGGAGAGATCGTCCTTCTGCCC
CTGGACGTCCTCAAGATCAAGCGTCAGACTAACCCCGAGGCTTTCCGTGG
CCGTGGTCTGTTCAAGATCATCTCCGATGAGGGTATGGGTCTCTACCGTG
GTGCTGGTTGGACTGCCGCCCGTAACGCTCCCGGATCTTTCGCTATCACC
TCCACCGCTGGTCTGAACCAGGTTGTTTTCAAGGAATACGCCAACGCCTC
TTTCGGCGGCAAGTTCACCTCTCTCTTCCCCGGTCTGGGTTACGCCGCCG
GGTACAAGGTTCTCCAGCGTATCTACAAGTACGGTGGTCAGCCTTTCGCT
CGCGACTACCTCGCCCAGCACTGGGGTTCCGACTTTGACAATGCTTTTGG
CAAGGGTACCGGCAAGGCGATCATGCACGCCACTGCTGGAAGGTTGATAC
CATCTCCAAGCGCTTGATGAGCAACCAGACCCGGGAACCGCCGGAATTGC
GGAGCTGATGGTCTTCCACCCTATGTCTCCCGCTATGGCCCAAGCCGGTG
CCGGCTCTGCCGCTAAGGATGTTAAGAGAGAATCCGCGACTGCTCGTCTT
CTGGGTTCCGCTCTTCGGTGGTTCCGCTTTCGCCAAGGAGTACATCTACA
ACCTGAAGGACTACAACACTGCTTCCTGGAGCCAGAACTTTGTTGCCTCC
ATCTGCGGTGCCAGTGCCTCCCTGGTCGTGTCAGCTCCTCTGGATGTGAT
CAAGACCCGTATCCAGAACCGCAACTTCGAGAACCCCGAGTCCGGCTTCC
GCATTCTGTCTAACATGGTCAAGAACGAGGGTGTCACCAGTTTCTTCAAG
GGTCTGACGCCCAAGCTCCTGATGACCGGACCCAAGCTCGTTTTCAGCTT
CTGGCTGGCTCAGACGTTGATCCCCGCCTTTGGCCAGGTCGTTTAATTTG
ATCGGTATCGGAGAGATCGTCCTTCTGCCCCTGGACGTCCTCAAGATCAA
GCGTCAGACTAACCCCGAGGCTTTCCGTGGCCGTGGTCTGTTCAAGATCA
TCTCCGATGAGGGTATGGGTCTCTACCGTGGTGCTGGTTGGACTGCCGCC
CGTAACGCTCCCGGATCTTTCGCTATCACCTCCACCGCTGGTCTGAACCA
GGTTGTTTTCAAGGAATACGCCAACGCCTCTTTCGGCGGCAAGTTCACCT
CTCTCTTCCCCGGTCTGGGTTACGCCGCCGGGTACAAGGTTCTCCAGCGT
ATCTACAAGTACGGTGGTCAGCCTTTCGCTCGCGACTACCTCGCCCAGCA
CTGGGGTTCCGACTTTGACAATGCTTTTGGCAAGGGTACCGGCAAGGCGA
TCATGCACGCCACTGCTGGAAGGTTGATACCATCTCCAAGCGCTTGATGA
GCAACCAGACCCGGGAACCGCCGGAATTGCGGAGCTGATGGTCTTCCACC
CTATGTCTCCCGCTATGGCCCAAGCCGGTGCCGGCTCTGCCGCTAAGGAT
GTTAAGAGAGAATCCGCGACTGCTCGTCTTCTGGGTTCCGCTCTTCGGTG
GTTCCGCTTTCGCCAAGGAGTACATCTACAACCTGAAGGACTACAACACT
GCTTCCTGGAGCCAGAACTTTGTTGCCTCCATCTGCGGTGCCAGTGCCTC
CCTGGTCGTGTCAGCTCCTCTGGATGTGATCAAGACCCGTATCCAGAACC
GCAACTTCGAGAACCCCGAGTCCGGCTTCCGCATTCTGTCTAACATGGTC
AAGAACGAGGGTGTCACCAGTTTCTTCAAGGGTCTGACGCCCAAGCTCCT
GATGACCGGACCCAAGCTCGTTTTCAGCTTCTGGCTGGCTCAGACGTTGA
TCCCCGCCTTTGGCCAGGTCGTTTAATTTGATCGGTATCGGAGAGATCGT
CCTTCTGCCCCTGGACGTCCTCAAGATCAAGCGTCAGACTAACCCCGAGG
CTTTCCGTGGCCGTGGTCTGTTCAAGATCATCTCCGATGAGGGTATGGGT
CTCTACCGTGGTGCTGGTTGGACTGCCGCCCGTAACGCTCCCGGATCTTT
CGCTATCACCTCCACCGCTGGTCTGAACCAGGTTGTTTTCAAGGAATACG
CCAACGCCTCTTTCGGCGGCAAGTTCACCTCTCTCTTCCCCGGTCTGGGT
TACGCCGCCGGGTACAAGGTTCTCCAGCGTATCTACAAGTACGGTGGTCA
GCCTTTCGCTCGCGACTACCTCGCCCAGCACTGGGGTTCCGACTTTGACA
ATGCTTTTGGCAAGGGTACCGGCAAGGCGATCATGCACGCCACTGCTGGA
AGGTTGATACCATCTCCAAGCGCTTGATGAGCAACCAGACCCGGGAACCG
CCGGAATTGCGGAGCTGATGGTCTTCCACCCTATGTCTCCCGCTATGGCC
CAAGCCGGTGCCGGCTCTGCCGCTAAGGATGTTAAGAGAGAATCCGCGAC
TGCTCGTCTTCTGGGTTCCGCTCTTCGGTGGTTCCGCTTTCGCCAAGGAG
TACATCTACAACCTGAAGGACTACAACACTGCTTCCTGGAGCCAGAACTT
TGTTGCCTCCATCTGCGGTGCCAGTGCCTCCCTGGTCGTGTCAGCTCCTC
TGGATGTGATCAAGACCCGTATCCAGAACCGCAACTTCGAGAACCCCGAG
TCCGGCTTCCGCATTCTGTCTAACATGGTCAAGAACGAGGGTGTCACCAG
TTTCTTCAAGGGTCTGACGCCCAAGCTCCTGATGACCGGACCCAAGCTCG
TTTTCAGCTTCTGGCTGGCTCAGACGTTGATCCCCGCCTTTGGCCAGGTC
GTTTAATTTGATCGGTATCGGAGAGATCGTCCTTCTGCCCCTGGACGTCC
TCAAGATCAAGCGTCAGACTAACCCCGAGGCTTTCCGTGGCCGTGGTCTG
TTCAAGATCATCTCCGATGAGGGTATGGGTCTCTACCGTGGTGCTGGTTG
GACTGCCGCCCGTAACGCTCCCGGATCTTTCGCTATCACCTCCACCGCTG
GTCTGAACCAGGTTGTTTTCAAGGAATACGCCAACGCCTCTTTCGGCGGC
AAGTTCACCTCTCTCTTCCCCGGTCTGGGTTACGCCGCCGGGTACAAGGT
TCTCCAGCGTATCTACAAGTACGGTGGTCAGCCTTTCGCTCGCGACTACC
TCGCCCAGCACTGGGGTTCCGACTTTGACAATGCTTTTGGCAAGGGTACC
GGCAAGGCGATCATGCACGCCACTGCTGGAAGGTTGATACCATCTCCAAG
CGCTTGATGAGCAACCAGACCCGGGAACCGCCGGAATTGCGGAGCTGATG
GTCTTCCACCCTATGTCTCCCGCTATGGCCCAAGCCGGTGCCGGCTCTGC
CGCTAAGGATGTTAAGAGAGAATCCGCGACTGCTCGTCTTCTGGGTTCCG
CTCTTCGGTGGTTCCGCTTTCGCCAAGGAGTACATCTACAACCTGAAGGA
CTACAACACTGCTTCCTGGAGCCAGAACTTTGTTGCCTCCATCTGCGGTG
CCAGTGCCTCCCTGGTCGTGTCAGCTCCTCTGGATGTGATCAAGACCCGT
ATCCAGAACCGCAACTTCGAGAACCCCGAGTCCGGCTTCCGCATTCTGTC
TAACATGGTCAAGAACGAGGGTGTCACCAGTTTCTTCAAGGGTCTGACGC
CCAAGCTCCTGATGACCGGACCCAAGCTCGTTTTCAGCTTCTGGCTGGCT
CAGACGTTGATCCCCGCCTTTGGCCAGGTCGTTTAATTTGATCGGTATCG
GAGAGATCGTCCTTCTGCCCCTGGACGTCCTCAAGATCAAGCGTCAGACT
AACCCCGAGGCTTTCCGTGGCCGTGGTCTGTTCAAGATCATCTCCGATGA
GGGTATGGGTCTCTACCGTGGTGCTGGTTGGACTGCCGCCCGTAACGCTC
CCGGATCTTTCGCTATCACCTCCACCGCTGGTCTGAACCAGGTTGTTTTC
AAGGAATACGCCAACGCCTCTTTCGGCGGCAAGTTCACCTCTCTCTTCCC
CGGTCTGGGTTACGCCGCCGGGTACAAGGTTCTCCAGCGTATCTACAAGT
ACGGTGGTCAGCCTTTCGCTCGCGACTACCTCGCCCAGCACTGGGGTTCC
GACTTTGACAATGCTTTTGGCAAGGGTACCGGCAAGGCGATCATGCACGC
CACTGCTGGAAGGTTGATACCATCTCCAAGCGCTTGATGAGCAACCAGAC
CCGGGAACCGCCGGAATTGCGGAGCTGATGGTCTTCCACCCTATGTCTCC
CGCTATGGCCCAAGCCGGTGCCGGCTCTGCCGCTAAGGATGTTAAGAGAG
AATCCGCGACTGCTCGTCTTCTGGGTTCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GGC1ATCC64974_50520Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50520-T1ATCC64974_50520-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50520-T1.cdsATCC64974_50520-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50520-T1.exon6ATCC64974_50520-T1.exon6Aspergillus niger N402exon
ATCC64974_50520-T1.exon5ATCC64974_50520-T1.exon5Aspergillus niger N402exon
ATCC64974_50520-T1.exon4ATCC64974_50520-T1.exon4Aspergillus niger N402exon
ATCC64974_50520-T1.exon3ATCC64974_50520-T1.exon3Aspergillus niger N402exon
ATCC64974_50520-T1.exon2ATCC64974_50520-T1.exon2Aspergillus niger N402exon
ATCC64974_50520-T1.exon1ATCC64974_50520-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09263JTO
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefPFAM:PF00153
ProductMitochondrial GTP/GDP carrier protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2356948..2358227 -
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