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ATCC64974_50530-T1, ATCC64974_50530-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50530-T1
Unique NameATCC64974_50530-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2359139..2359689-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50530-T1 ID=ATCC64974_50530-T1|Name=ATCC64974_50530-T1|organism=Aspergillus niger N402|type=mRNA|length=551bp|location=Sequence derived from alignment at OGUI01000007.1:2359139..2359689- (Aspergillus niger N402)
ATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGCAAGGCAGA
GGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGTACGTCTAT
CCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTTTTGGGGGA
AGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACCCGGCTCCT
ATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCAT
CGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCG
TCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTT
ATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTAT
CTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCACGTATGCCG
ATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTGCTAACTCG
GATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGTGACTGCTA
G
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Coding sequence (CDS) from alignment at OGUI01000007.1:2359139..2359689-

>ATCC64974_50530-T1 ID=ATCC64974_50530-T1|Name=ATCC64974_50530-T1|organism=Aspergillus niger N402|type=CDS|length=1071bp|location=Sequence derived from alignment at OGUI01000007.1:2359139..2359689- (Aspergillus niger N402)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG8ATCC64974_50530Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50530-T1ATCC64974_50530-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50530-T1.cdsATCC64974_50530-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50530-T1.exon3ATCC64974_50530-T1.exon3Aspergillus niger N402exon
ATCC64974_50530-T1.exon2ATCC64974_50530-T1.exon2Aspergillus niger N402exon
ATCC64974_50530-T1.exon1ATCC64974_50530-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09265BTA
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR004241
DBxrefPFAM:PF02991
DBxrefPFAM:PF04110
Productubiquitin-like protein atg8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2359139..2359689 -
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