You are here

Home

ATCC64974_50830-T1, ATCC64974_50830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50830-T1
Unique NameATCC64974_50830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2543292..2544896+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50830-T1 ID=ATCC64974_50830-T1|Name=ATCC64974_50830-T1|organism=Aspergillus niger N402|type=mRNA|length=1605bp|location=Sequence derived from alignment at OGUI01000007.1:2543292..2544896+ (Aspergillus niger N402)
ATGGCCAAGCGTGAACTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAA
AAAGAAGTCAAGAAACGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAG
CCAGTGCGCAGTCCTCTGAGACGCAGTACACTGACCCGAAAGAACCTTCA
CCAGCAGTCATAGAGAAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGA
TACTTTAGAGGGTGCAACGAAGCTTCATCCCATTACCTCTTTCTCTCACC
TACCTACCTGCAACAGTGCACTGTACCGTCCTCTTGAATCTTTCACTTCT
CCGACTGCCATCCAGTCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGA
TGTAATCGGCATTGCTGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCT
TGCCGTGCCTGAAAAACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTAT
AAGCCGACAGCGGTGATGATTTCCCCAACGAGAGAACTTGCAATGCAGAT
ACATGATCAGATCTCGAAATTTGCAGAATTAGTGGATATCAAGGTAGCTT
GTATCTTCGGGGGTGTGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACA
GCGGCTATTGTCGTGGCGACGCCAGGAAGACTGAAGGATCTTCAAAATGA
TGGCTCGGTGGATCTAGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAG
ATCGCATGCTGGACAAAGGTTTCGAACAGGATATCAAGGATATCATCCGC
CCCATGCCGGTGTCAAAGCGCCAAACTGTAATGTTCACTGCGACCTGGCC
CCCAGTGGTTAGGGATCTTGCTGCAACGTTTATGACTTCTCCTGTGACGG
TCACAATTGGTGGAGAGCCCTCGGCTGATCCGCGCGCAAATACTAGGATC
AAGCAAGTTGTTGAGGTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGT
GCAGCTATTGAATAAGTATCAGAAGGGCCCATCCAGCTCGGATAAGATTC
TGGTGTTCTGCTTGTATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTT
TGGAATAAAGGCTTCAAGGTTGCCGGAATACACGGTGATTTAGGTCAACA
GGAACGATTCAAAAGTTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTC
TTGTCGCAACTGATGTGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAG
CTTGTCATCAACGTTACGTTTCCCCTGACCGTTGAGGATTACGTACATCG
AATTGGCCGGTTAGTGAAGTACCTCGTCCCTGTATGTTGAGTATCGCCTA
CTGACTGGCCCAAAGGACCGGCCGTGCTGGAGCTGAGGGCCATGCCATCA
CTCTATTTACTGAGGTTGACAAAGCTCAGTCTGGAGCGTAAGTAGTCATT
GTCTTGGAAGCATTCCGATCAAACTCAACCGAGACTGACATGTTATAGTT
TAATAAACGTTCTAAAAGCGGCTAATCAGGATGTACCCGAGGATCTTCTC
AAATTCGGGGCAACGGTTAAAAAGAAGCAACATGACGCATACGGCGCCTT
TTATAAGGATGTCGACACCAATAAGACATCAACCAAGATCGTTTTTGACG
ATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2543292..2544896+

>ATCC64974_50830-T1 ID=ATCC64974_50830-T1|Name=ATCC64974_50830-T1|organism=Aspergillus niger N402|type=CDS|length=4464bp|location=Sequence derived from alignment at OGUI01000007.1:2543292..2544896+ (Aspergillus niger N402)
ATGGCCAAGCGTGAACTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAA
AAAGAAGTCAAGAAACGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAG
CCAGTGCGCAGTCCTCTGAGACGCAGTACACTGACCCGAAAGAACCTTCA
CCAGCAGTCATAGAGAAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGA
TACTTTAGAGGGTGCAACGAAGCTTCATCCCATTACCTCTTTCTCTCACC
TACCTACCTGCAACAGTGCACTGTACCGTCCTCTTGAATCTTTCACTTCT
CCGACTGCCATCCAGTCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGA
TGTAATCGGCATTGCTGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCT
TGCCGTGCCTGAAAAACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTAT
AAGCCGACAGCGGTGATGATTTCCCCAACGAGAGAACTTGCAATGCAGAT
ACATGATCAGATCTCGAAATTTGCAGAATTAGTGGATATCAAGGTAGCTT
GTATCTTCGGGGGTGTGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACA
GCGGCTATTGTCGTGGCGACGCCAGGAAGACTGAAGGATCTTCAAAATGA
TGGCTCGGTGGATCTAGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAG
ATCGCATGCTGGACAAAGGTTTCGAACAGGATATCAAGGATATCATCCGC
CCCATGCCGGTGTCAAAGCGCCAAACTGTAATGTTCACTGCGACCTGGCC
CCCAGTGGTTAGGGATCTTGCTGCAACGTTTATGACTTCTCCTGTGACGG
TCACAATTGGTGGAGAGCCCTCGGCTGATCCGCGCGCAAATACTAGGATC
AAGCAAGTTGTTGAGGTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGT
GCAGCTATTGAATAAGTATCAGAAGGGCCCATCCAGCTCGGATAAGATTC
TGGTGTTCTGCTTGTATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTT
TGGAATAAAGGCTTCAAGGTTGCCGGAATACACGGTGATTTAGGTCAACA
GGAACGATTCAAAAGTTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTC
TTGTCGCAACTGATGTGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAG
CTTGTCATCAACGTTACGTTTCCCCTGACCGTTGAGGATTACGTACATCG
AATTGGCCGGACCGGCCGTGCTGGAGCTGAGGGCCATGCCATCACTCTAT
TTACTGAGGTTGACAAAGCTCAGTCTGGAGCTTTAATAAACGTTCTAAAA
GCGGCTAATCAGGATGTACCCGAGGATCTTCTCAAATTCGGGGCAACGGT
TAAAAAGAAGCAACATGACGCATACGGCGCCTTTTATAAGGATGTCGACA
CCAATAAGACATCAACCAAGATCGTTTTTGACGATTGAATGGCCAAGCGT
GAACTTCAAGATAAGGGTAGCACTGAGCATAGGGCGAAAAAGAAGTCAAG
AAACGAAAAGCACACAAAGAAGGCTGAGGACTCCCAAGCCAGTGCGCAGT
CCTCTGAGACGCAGTACACTGACCCGAAAGAACCTTCACCAGCAGTCATA
GAGAAGTTTCTCGAAGAAAACTCTGTCAAGATAACGGATACTTTAGAGGG
TGCAACGAAGCTTCATCCCATTACCTCTTTCTCTCACCTACCTACCTGCA
ACAGTGCACTGTACCGTCCTCTTGAATCTTTCACTTCTCCGACTGCCATC
CAGTCAGCAACCTGGCCTTTCCTGTTTTCTGGCCGTGATGTAATCGGCAT
TGCTGAAACTGGGAGTGGTAAGACGCTTGGCTTCGGCTTGCCGTGCCTGA
AAAACTTACAAGACTCGGCGAAGAAGGGAAAGCCTTATAAGCCGACAGCG
GTGATGATTTCCCCAACGAGAGAACTTGCAATGCAGATACATGATCAGAT
CTCGAAATTTGCAGAATTAGTGGATATCAAGGTAGCTTGTATCTTCGGGG
GTGTGAAGAAAGAGGAGCAGCGTGAGGCTTTGAAGACAGCGGCTATTGTC
GTGGCGACGCCAGGAAGACTGAAGGATCTTCAAAATGATGGCTCGGTGGA
TCTAGGAAAAGTCAAGTATCTTGTTCTGGATGAAGCAGATCGCATGCTGG
ACAAAGGTTTCGAACAGGATATCAAGGATATCATCCGCCCCATGCCGGTG
TCAAAGCGCCAAACTGTAATGTTCACTGCGACCTGGCCCCCAGTGGTTAG
GGATCTTGCTGCAACGTTTATGACTTCTCCTGTGACGGTCACAATTGGTG
GAGAGCCCTCGGCTGATCCGCGCGCAAATACTAGGATCAAGCAAGTTGTT
GAGGTGGTGAAGCCGCACGAAAAAGAACAGAGGCTTGTGCAGCTATTGAA
TAAGTATCAGAAGGGCCCATCCAGCTCGGATAAGATTCTGGTGTTCTGCT
TGTATAAGAAGGAGGCTGTGCGTGTCGAGAGACTTCTTTGGAATAAAGGC
TTCAAGGTTGCCGGAATACACGGTGATTTAGGTCAACAGGAACGATTCAA
AAGTTTGGAATCCTTCAAAAAAGGCGTCTCAACCGTTCTTGTCGCAACTG
ATGTGGCAGCTCGTGGTCTCGACATACCCTCAGTTAAGCTTGTCATCAAC
GTTACGTTTCCCCTGACCGTTGAGGATTACGTACATCGAATTGGCCGGAC
CGGCCGTGCTGGAGCTGAGGGCCATGCCATCACTCTATTTACTGAGGTTG
ACAAAGCTCAGTCTGGAGCTTTAATAAACGTTCTAAAAGCGGCTAATCAG
GATGTACCCGAGGATCTTCTCAAATTCGGGGCAACGGTTAAAAAGAAGCA
ACATGACGCATACGGCGCCTTTTATAAGGATGTCGACACCAATAAGACAT
CAACCAAGATCGTTTTTGACGATTGAATGGCCAAGCGTGAACTTCAAGAT
AAGGGTAGCACTGAGCATAGGGCGAAAAAGAAGTCAAGAAACGAAAAGCA
CACAAAGAAGGCTGAGGACTCCCAAGCCAGTGCGCAGTCCTCTGAGACGC
AGTACACTGACCCGAAAGAACCTTCACCAGCAGTCATAGAGAAGTTTCTC
GAAGAAAACTCTGTCAAGATAACGGATACTTTAGAGGGTGCAACGAAGCT
TCATCCCATTACCTCTTTCTCTCACCTACCTACCTGCAACAGTGCACTGT
ACCGTCCTCTTGAATCTTTCACTTCTCCGACTGCCATCCAGTCAGCAACC
TGGCCTTTCCTGTTTTCTGGCCGTGATGTAATCGGCATTGCTGAAACTGG
GAGTGGTAAGACGCTTGGCTTCGGCTTGCCGTGCCTGAAAAACTTACAAG
ACTCGGCGAAGAAGGGAAAGCCTTATAAGCCGACAGCGGTGATGATTTCC
CCAACGAGAGAACTTGCAATGCAGATACATGATCAGATCTCGAAATTTGC
AGAATTAGTGGATATCAAGGTAGCTTGTATCTTCGGGGGTGTGAAGAAAG
AGGAGCAGCGTGAGGCTTTGAAGACAGCGGCTATTGTCGTGGCGACGCCA
GGAAGACTGAAGGATCTTCAAAATGATGGCTCGGTGGATCTAGGAAAAGT
CAAGTATCTTGTTCTGGATGAAGCAGATCGCATGCTGGACAAAGGTTTCG
AACAGGATATCAAGGATATCATCCGCCCCATGCCGGTGTCAAAGCGCCAA
ACTGTAATGTTCACTGCGACCTGGCCCCCAGTGGTTAGGGATCTTGCTGC
AACGTTTATGACTTCTCCTGTGACGGTCACAATTGGTGGAGAGCCCTCGG
CTGATCCGCGCGCAAATACTAGGATCAAGCAAGTTGTTGAGGTGGTGAAG
CCGCACGAAAAAGAACAGAGGCTTGTGCAGCTATTGAATAAGTATCAGAA
GGGCCCATCCAGCTCGGATAAGATTCTGGTGTTCTGCTTGTATAAGAAGG
AGGCTGTGCGTGTCGAGAGACTTCTTTGGAATAAAGGCTTCAAGGTTGCC
GGAATACACGGTGATTTAGGTCAACAGGAACGATTCAAAAGTTTGGAATC
CTTCAAAAAAGGCGTCTCAACCGTTCTTGTCGCAACTGATGTGGCAGCTC
GTGGTCTCGACATACCCTCAGTTAAGCTTGTCATCAACGTTACGTTTCCC
CTGACCGTTGAGGATTACGTACATCGAATTGGCCGGACCGGCCGTGCTGG
AGCTGAGGGCCATGCCATCACTCTATTTACTGAGGTTGACAAAGCTCAGT
CTGGAGCTTTAATAAACGTTCTAAAAGCGGCTAATCAGGATGTACCCGAG
GATCTTCTCAAATTCGGGGCAACGGTTAAAAAGAAGCAACATGACGCATA
CGGCGCCTTTTATAAGGATGTCGACACCAATAAGACATCAACCAAGATCG
TTTTTGACGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP3ATCC64974_50830Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50830-T1.exon1ATCC64974_50830-T1.exon1Aspergillus niger N402exon
ATCC64974_50830-T1.exon2ATCC64974_50830-T1.exon2Aspergillus niger N402exon
ATCC64974_50830-T1.exon3ATCC64974_50830-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50830-T1.cdsATCC64974_50830-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50830-T1ATCC64974_50830-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092625P1
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA-dependent ATPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2543292..2544896 +
Powered by Drupal