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ATCC64974_50960-T1, ATCC64974_50960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50960-T1
Unique NameATCC64974_50960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2581770..2583025-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50960-T1 ID=ATCC64974_50960-T1|Name=ATCC64974_50960-T1|organism=Aspergillus niger N402|type=mRNA|length=1256bp|location=Sequence derived from alignment at OGUI01000007.1:2581770..2583025- (Aspergillus niger N402)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTA
TTATAGCAATTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAG
TAGACCCTTGTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTT
GTTTTGTAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGC
TGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGA
GCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGT
GCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGA
GGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGT
TTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACC
AGATAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:2581770..2583025-

>ATCC64974_50960-T1 ID=ATCC64974_50960-T1|Name=ATCC64974_50960-T1|organism=Aspergillus niger N402|type=CDS|length=3357bp|location=Sequence derived from alignment at OGUI01000007.1:2581770..2583025- (Aspergillus niger N402)
TTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTA
TGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCA
GCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAAT
AAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAG
GACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACG
ATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTC
CCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATC
CTTATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCT
CCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAA
TGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATAC
CCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGC
GCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCA
GAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCC
TTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCA
AAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAG
AGGATTCATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGA
CGACACCAGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACT
TCATTCTTTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTC
GTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAG
AACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGG
CTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAA
GCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCG
AAGAAGATATCTACTCATGTTCGGAAACCAGCATTTCAAAAAATGTAATG
AGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTG
ACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGC
TCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTT
TGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCC
GTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGC
AGAAGCGACCAGATAGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTG
GTCATCGTCGGCCAAGATCCTTATCATAATTATAACCAGGCCCATGGCCT
TGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACA
TCTTTAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAAC
AAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAA
CACTTGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGG
GCTGGGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGG
ACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGT
GACAGGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAA
GCCCGCTAAGTGCGTCAAGAGGATTCATGGCCGGTAGAGCAGGCATGAAA
CGTGATGCTAATCATTTGACGACACCAGAGGCCGATTCAAAGAAACCCAA
GGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCCAAGAACAAGTCCA
GCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGG
GTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGA
CACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGC
CTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGA
GCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATGTTCGGAAACCAG
CATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGACGA
AGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTG
CCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATCGCT
AAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCC
TGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATGCGC
TGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCATGGC
CGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGG
CCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGT
GCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGC
CTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGC
TCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTC
AAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCA
GAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCT
ACTCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844uracil DNA N-glycosylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_50960ATCC64974_50960Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50960-T1ATCC64974_50960-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50960-T1.cdsATCC64974_50960-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50960-T1.exon3ATCC64974_50960-T1.exon3Aspergillus niger N402exon
ATCC64974_50960-T1.exon2ATCC64974_50960-T1.exon2Aspergillus niger N402exon
ATCC64974_50960-T1.exon1ATCC64974_50960-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264GMT
DBxrefInterPro:IPR018085
DBxrefInterPro:IPR002043
DBxrefInterPro:IPR036895
DBxrefInterPro:IPR005122
DBxrefPFAM:PF03167
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2581770..2583025 -
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