You are here

Home

ATCC64974_51070-T1, ATCC64974_51070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_51070-T1
Unique NameATCC64974_51070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2610243..2611542-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_51070-T1 ID=ATCC64974_51070-T1|Name=ATCC64974_51070-T1|organism=Aspergillus niger N402|type=mRNA|length=1300bp|location=Sequence derived from alignment at OGUI01000007.1:2610243..2611542- (Aspergillus niger N402)
ATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCC
CTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGA
TGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAA
CGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGATGTGAGTCGTCCACA
AACTTGGCCCATGTACCTTACAGATTTGCCTAACCTGGAGGGGCTATTTT
TTTTAAATAGGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCG
TGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCT
CGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAA
ACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATT
TCGATGTTTGCATCAGCAACACGCCGTATCAGGTACGCTCTATAAACTAT
CTATCTCTTCAAAGTGGAAGAAAGGCTAATTATTCGCCCGCTAGATCTCT
TCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCGCATTTG
TGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGG
GCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGGGCTAAG
ATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCCACCGCT
GGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGCCACAGA
TCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTCCGGAAG
AACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCATGGATAT
GTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCCCAGTTG
AGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATTGGCAAC
GCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGAGGGCAT
GGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAACAGACGA
ACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAG
GGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGA
TGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGAACGACT
TCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2610243..2611542-

>ATCC64974_51070-T1 ID=ATCC64974_51070-T1|Name=ATCC64974_51070-T1|organism=Aspergillus niger N402|type=CDS|length=3492bp|location=Sequence derived from alignment at OGUI01000007.1:2610243..2611542- (Aspergillus niger N402)
ATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCG
CATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGA
AGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGG
GCTAAGATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCC
ACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGC
CACAGATCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTC
CGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCAT
GGATATGTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCC
CAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATT
GGCAACGCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGA
GGGCATGGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAAC
AGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAG
AAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTT
GGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGA
ACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTC
AGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCGTGAA
GATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCTCGAA
TGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAAACGC
TTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATTTCGA
TGTTTGCATCAGCAACACGCCGTATCAGATGCCCAAGGTCAAACAGCAGA
AGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAG
ACGAAGGCCGCCAACACCGTCTTCAAGATGAATACCGATCTCGGCCAGCA
CATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGT
TGAAACAGAGCGATATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACG
TCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCT
AAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCA
ATGCTCAGATGTGGGCTAAGATCGACCACATCATGAAGGTGGGCAAGAAC
AATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACC
TAAGAACCCCAGGCCACAGATCAACTACGATGAGTGGGACGGGCTTCTGA
GAATTCTATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGC
AAGTCCACGGTCATGGATATGTTGGAAGCCAACTATCGAACATGGTGTGC
GCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTG
ATGCGATGGACATTGGCAACGCGCAAGATGAGGATGATGATGAGGGTGAA
GACGAGCCTGACGAGGGCATGGACGTGGACGACGAAGATGACGTACCCGA
CTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATC
GGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAG
GTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAG
GATGTGCGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGA
AGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGT
AACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGA
GCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGC
CTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGAC
CTTCCATATTTCGATGTTTGCATCAGCAACACGCCGTATCAGATGCCCAA
GGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCG
ATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGATGAATACC
GATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGT
TGACAAAGCCGAGTTGAAACAGAGCGATATCTCTTCTCCCCTCACATTTA
AACTTCTCGCGACGTCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAA
CGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAG
TCGACTCTCCGTCAATGCTCAGATGTGGGCTAAGATCGACCACATCATGA
AGGTGGGCAAGAACAATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTT
GTCCGTCTGGTACCTAAGAACCCCAGGCCACAGATCAACTACGATGAGTG
GGACGGGCTTCTGAGAATTCTATTCGTCCGGAAGAACAAGACAATTCGGT
CAAGTTTCCTTGGCAAGTCCACGGTCATGGATATGTTGGAAGCCAACTAT
CGAACATGGTGTGCGCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGA
AGGCGCCGAATCTGATGCGATGGACATTGGCAACGCGCAAGATGAGGATG
ATGATGAGGGTGAAGACGAGCCTGACGAGGGCATGGACGTGGACGACGAA
GATGACGTACCCGACTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGA
GGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGC
TCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCG
GACAAGCGTGCAAGGATGTGCGATGAGAACGACTTCCTGAAGTTATTGTG
GGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTG
GTCCTGGTACCGGTAACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAA
GTTATCGCCGTTGAGCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCG
TGTTCAAGGCACGCCTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATG
TGATCAAAACAGACCTTCCATATTTCGATGTTTGCATCAGCAACACGCCG
TATCAGATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGC
CAGTCCCTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCT
TCAAGATGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTG
GCTCAACGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649rRNA methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_51070ATCC64974_51070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51070-T1ATCC64974_51070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51070-T1.cdsATCC64974_51070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51070-T1.exon3ATCC64974_51070-T1.exon3Aspergillus niger N402exon
ATCC64974_51070-T1.exon2ATCC64974_51070-T1.exon2Aspergillus niger N402exon
ATCC64974_51070-T1.exon1ATCC64974_51070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263720
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR020596
DBxrefInterPro:IPR011530
DBxrefInterPro:IPR001737
DBxrefInterPro:IPR020598
DBxrefPFAM:PF00398
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2610243..2611542 -
Powered by Drupal