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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:2610243..2611542- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_51070-T1 ID=ATCC64974_51070-T1|Name=ATCC64974_51070-T1|organism=Aspergillus niger N402|type=mRNA|length=1300bp|location=Sequence derived from alignment at OGUI01000007.1:2610243..2611542- (Aspergillus niger N402) ATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCC
CTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGA
TGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAA
CGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGATGTGAGTCGTCCACA
AACTTGGCCCATGTACCTTACAGATTTGCCTAACCTGGAGGGGCTATTTT
TTTTAAATAGGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCG
TGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCT
CGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAA
ACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATT
TCGATGTTTGCATCAGCAACACGCCGTATCAGGTACGCTCTATAAACTAT
CTATCTCTTCAAAGTGGAAGAAAGGCTAATTATTCGCCCGCTAGATCTCT
TCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCGCATTTG
TGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGG
GCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGGGCTAAG
ATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCCACCGCT
GGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGCCACAGA
TCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTCCGGAAG
AACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCATGGATAT
GTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCCCAGTTG
AGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATTGGCAAC
GCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGAGGGCAT
GGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAACAGACGA
ACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAG
GGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGA
TGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGAACGACT
TCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGA
back to topCoding sequence (CDS) from alignment at OGUI01000007.1:2610243..2611542- >ATCC64974_51070-T1 ID=ATCC64974_51070-T1|Name=ATCC64974_51070-T1|organism=Aspergillus niger N402|type=CDS|length=3492bp|location=Sequence derived from alignment at OGUI01000007.1:2610243..2611542- (Aspergillus niger N402) ATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCG CATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGA AGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGG GCTAAGATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCC ACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGC CACAGATCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTC CGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCAT GGATATGTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCC CAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATT GGCAACGCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGA GGGCATGGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAAC AGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAG AAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTT GGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGA ACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTC AGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCGTGAA GATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCTCGAA TGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAAACGC TTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATTTCGA TGTTTGCATCAGCAACACGCCGTATCAGATGCCCAAGGTCAAACAGCAGA AGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAG ACGAAGGCCGCCAACACCGTCTTCAAGATGAATACCGATCTCGGCCAGCA CATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGT TGAAACAGAGCGATATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACG TCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCT AAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCA ATGCTCAGATGTGGGCTAAGATCGACCACATCATGAAGGTGGGCAAGAAC AATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACC TAAGAACCCCAGGCCACAGATCAACTACGATGAGTGGGACGGGCTTCTGA GAATTCTATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGC AAGTCCACGGTCATGGATATGTTGGAAGCCAACTATCGAACATGGTGTGC GCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTG ATGCGATGGACATTGGCAACGCGCAAGATGAGGATGATGATGAGGGTGAA GACGAGCCTGACGAGGGCATGGACGTGGACGACGAAGATGACGTACCCGA CTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATC GGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAG GTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAG GATGTGCGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGA AGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTGGTCCTGGTACCGGT AACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGA GCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGC CTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGAC CTTCCATATTTCGATGTTTGCATCAGCAACACGCCGTATCAGATGCCCAA GGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCG ATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGATGAATACC GATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGT TGACAAAGCCGAGTTGAAACAGAGCGATATCTCTTCTCCCCTCACATTTA AACTTCTCGCGACGTCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAA CGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAG TCGACTCTCCGTCAATGCTCAGATGTGGGCTAAGATCGACCACATCATGA AGGTGGGCAAGAACAATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTT GTCCGTCTGGTACCTAAGAACCCCAGGCCACAGATCAACTACGATGAGTG GGACGGGCTTCTGAGAATTCTATTCGTCCGGAAGAACAAGACAATTCGGT CAAGTTTCCTTGGCAAGTCCACGGTCATGGATATGTTGGAAGCCAACTAT CGAACATGGTGTGCGCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGA AGGCGCCGAATCTGATGCGATGGACATTGGCAACGCGCAAGATGAGGATG ATGATGAGGGTGAAGACGAGCCTGACGAGGGCATGGACGTGGACGACGAA GATGACGTACCCGACTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGA GGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGC TCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCG GACAAGCGTGCAAGGATGTGCGATGAGAACGACTTCCTGAAGTTATTGTG GGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGAGTTGTTCTGGAAATTG GTCCTGGTACCGGTAACTTGACCGTGAAGATCCTCGAACAGGCGAAAAAA GTTATCGCCGTTGAGCTCGACCCTCGAATGGCTGCCGAAGTCACCAAGCG TGTTCAAGGCACGCCTGCCCAGAAACGCTTAGACGTTATCCTTGGAGATG TGATCAAAACAGACCTTCCATATTTCGATGTTTGCATCAGCAACACGCCG TATCAGATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGC CAGTCCCTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCT TCAAGATGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTG GCTCAACGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006364 | rRNA processing |
GO:0000154 | rRNA modification |
Vocabulary: Molecular Function
Term | Definition |
GO:0000179 | rRNA (adenine-N6,N6-)-dimethyltransferase activity |
GO:0008649 | rRNA methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_51070-T1 | ATCC64974_51070-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09263720 |
DBxref | InterPro:IPR029063 |
DBxref | InterPro:IPR020596 |
DBxref | InterPro:IPR011530 |
DBxref | InterPro:IPR001737 |
DBxref | InterPro:IPR020598 |
DBxref | PFAM:PF00398 |
DBxref | PFAM:PF13649 |
DBxref | PFAM:PF08241 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:2610243..2611542 - |
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