|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:2616107..2617681- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_51090-T1 ID=ATCC64974_51090-T1|Name=ATCC64974_51090-T1|organism=Aspergillus niger N402|type=mRNA|length=1575bp|location=Sequence derived from alignment at OGUI01000007.1:2616107..2617681- (Aspergillus niger N402) ATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTAC
AATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGT
CTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTAC
ACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGC
TACTTCCCTCTTTCTTCTAGGTATGTCTGTGCATTGTCACGTCTATCCCC
ATCTTCTTGCGAGGACCTATCTATATCATTGTTCTTGAGTTTCTGTCTCT
TATCTTACAATAAGCCTCGGTCCCACTTTTAACCTGAATGCGTATGCTGA
CGCCGCCCTTCTCCCCCAACGAACAGGACAACTGAACCAAAGCGAATTGT
CGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAACCGAGCATCTA
CATAACAATTTCGTATGCGCAATCATTGGCAATCTTACACGGGATCTTCC
GGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTCCGTCG
TGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGACGGAG
GTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATTCCCGA
GGTATGCGACCTGCTCCAGAGATGCGACAGCCTCCCCCCTGAGATGTGCG
CGTACAAGGCTGACCATGGATCTATACAAAGCGTGACCCCCATGAACTGT
CGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTGCCA
AGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACAAGTAGGTTCAT
GCCAGAGATCTCGTCTGTTTTTCGTCTGCTCGACCGAATGATGCTAATCA
TCCTGGATCTCGGTAGACTGGGAACTCGAAATTCGAAAACGATATGCACA
ACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCACG
CACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAGC
CTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGGA
AGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGGA
CAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGAG
GAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTCT
TCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGC
GAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATATG
CCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAGA
AACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGA
AGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGGCAAAATTCGAC
TGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGGA
TGAATGTTTGTCGATGGCCTCGTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:2616107..2617681- >ATCC64974_51090-T1 ID=ATCC64974_51090-T1|Name=ATCC64974_51090-T1|organism=Aspergillus niger N402|type=CDS|length=5052bp|location=Sequence derived from alignment at OGUI01000007.1:2616107..2617681- (Aspergillus niger N402) ACTGGGAACTCGAAATTCGAAAACGATATGCACAACCTCTGGCGTCAGAG TCCGGCGAATTCCCGGACGCCGAATCTATCCACGCACGTATGGTTCCCAT CTGCTACGAAGAATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCCGAGT TCATGGCGATCGCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGTAGTG TTCTCACGGACGAGATCGAACGGCCCTTCAGGGACAATAAACGGCATGAT GATGCGCAAGTACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTCACGC GAGGAGAGATCGTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGAGGCC AAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGCGAGATCTCCGATTATC CTTGGAACTCGGCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTGGATC AAATCATGGGTGGGTATCTCGAGGATGAGTTAGAAACAGACAAACAGGAC CGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTTTCAT GGACGAAATGGACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGGACAG TCACGGATCGGGAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTCGATG GCCTCGTGACGTGACCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTA TCATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGG GCGGGTTGAATAAGACAAGACAACTGAACCAAAGCGAATTGTCGTCGCGA GTCGATCATATAATATGCGCCGATCAAAAAACCGAGCATCTACATAACAA TTTCGTATGCGCAATCATTGGCAATCTTACACGGGATCTTCCGGATCATG GTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAAAG CCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATGCA ACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATTCCCGAGATGCAGA TCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTACAATAGCC TCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGTCTACCAA AGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTACACCGAGC TGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGCTACTTCC CTCTTTCTTCTAGACTGGGAACTCGAAATTCGAAAACGATATGCACAACC TCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCACGCAC GTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAGCCTT CCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGGAAGT TCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGGACAA TAAACGGCATGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGAGGAA TTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTCTTCT CCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGCGAG ATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATATGCCT CTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAGAAAC AGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGAAGC CCGACAGTTTCATGGACGAAATGGACGTGGACGAGGCAAAATTCGACTGG GAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGGATGA ATGTTTGTCGATGGCCTCGTGACGTGACCCCCATGAACTGTCGCCGAACG AACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTA CCAGCTAGTGCGGGCGGGTTGAATAAGACAAGACAACTGAACCAAAGCGA ATTGTCGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAACCGAGC ATCTACATAACAATTTCGTATGCGCAATCATTGGCAATCTTACACGGGAT CTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTC CGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGA CGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATT CCCGAGATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTC CACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGC AGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCC ATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAA GGAAGCTACTTCCCTCTTTCTTCTAGACTGGGAACTCGAAATTCGAAAAC GATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAA TCTATCCACGCACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAG TGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTT TTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGC CCTTCAGGGACAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGCT CGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCG CGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCC TTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCT GAGTCATATGCCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGG ATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTC CCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGGC AAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTG CCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGACGTGACCCCCATGAA CTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTT GCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACAAGACAAC TGAACCAAAGCGAATTGTCGTCGCGAGTCGATCATATAATATGCGCCGAT CAAAAAACCGAGCATCTACATAACAATTTCGTATGCGCAATCATTGGCAA TCTTACACGGGATCTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGA ACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAA CAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACG AATCAAAGCTATTCCCGAGATGCAGATCGATCCGGCTGCTCTGAGTCGGA CAGACTCGGCCTCCACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAAT GCTCCGCCAACGCAGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCT GGATCTTGAGCCCATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATT GGGCTGACTACAAGGAAGCTACTTCCCTCTTTCTTCTAGACTGGGAACTC GAAATTCGAAAACGATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATT CCCGGACGCCGAATCTATCCACGCACGTATGGTTCCCATCTGCTACGAAG AATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATC GCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGAC GAGATCGAACGGCCCTTCAGGGACAATAAACGGCATGATGATGCGCAAGT ACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATC GTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAG CACCCGAAAACCCTTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCG GCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTGGATCAAATCATGGGT GGGTATCTCGAGGATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGA GGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGG ACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGG GAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGACG TGACCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGA AACAGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAAT AAGACAAGACAACTGAACCAAAGCGAATTGTCGTCGCGAGTCGATCATAT AATATGCGCCGATCAAAAAACCGAGCATCTACATAACAATTTCGTATGCG CAATCATTGGCAATCTTACACGGGATCTTCCGGATCATGGTGTCGCAAGT TGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCGGG CGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCCCC GGGATCGTCGACGAATCAAAGCTATTCCCGAGATGCAGATCGATCCGGCT GCTCTGAGTCGGACAGACTCGGCCTCCACTACAATAGCCTCGTCTAAAAG CACTGCTCCAAATGCTCCGCCAACGCAGAAGTCTACCAAAGCCCTCATTT CCGTGCCGCGCCTGGATCTTGAGCCCATCTACACCGAGCTGAAGGCCGCC ATCGGCGACAATTGGGCTGACTACAAGGAAGCTACTTCCCTCTTTCTTCT AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0070461 | SAGA-type complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_51090-T1 | ATCC64974_51090-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR024738 |
DBxref | PFAM:PF12767 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:2616107..2617681 - |
|