|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:2686228..2686717- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_51320-T1 ID=ATCC64974_51320-T1|Name=ATCC64974_51320-T1|organism=Aspergillus niger N402|type=mRNA|length=490bp|location=Sequence derived from alignment at OGUI01000007.1:2686228..2686717- (Aspergillus niger N402)
ATGTCTGAGACTTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCAT
GGCCATATACTGACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCT
CACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGT
CTGTCTGTCTGCTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGT
ACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCT
CCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCG
TGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTG
ATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGAT
CAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:2686228..2686717- >ATCC64974_51320-T1 ID=ATCC64974_51320-T1|Name=ATCC64974_51320-T1|organism=Aspergillus niger N402|type=CDS|length=1134bp|location=Sequence derived from alignment at OGUI01000007.1:2686228..2686717- (Aspergillus niger N402)
CCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTCGCTGCC
GACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGCTGAGGA
CAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTG
CTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAG
GCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAG
ACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTCACCCAGAACCT
CCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTG
CTAACGAGGATGTCTGAGACTTCTGCCGCCACCAAGACTCTTAACCGTGG
TACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCC
TCCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTC
GTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGT
GATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGA
TCAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAACCTGGCCCC
TCGCCGATGAGGCCCTCACCCAGAACCTCCTGGACCTTGTCCAGCAGGCC
GGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGATGTCTGAGACTT
CTGCCGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTC
GCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGC
TGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCG
GCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACC
AACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGT
CGAGAGACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTCACCCA
GAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGA
AGGGTGCTAACGAGGATGTCTGAGACTTCTGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_51320-T1 | ATCC64974_51320-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR002415 |
| DBxref | InterPro:IPR018492 |
| DBxref | PFAM:PF01248 |
| Product | RNA binding protein snu13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:2686228..2686717 - |
|
