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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:2796868..2798022- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_51600-T1 ID=ATCC64974_51600-T1|Name=ATCC64974_51600-T1|organism=Aspergillus niger N402|type=mRNA|length=1155bp|location=Sequence derived from alignment at OGUI01000007.1:2796868..2798022- (Aspergillus niger N402) ATGTCCACCAACGATGTGAAGGCCTCACCGGAGGCACTCATCTCGAAATT
CGAGGTGAGCAGACTCCTCAAACAAGGCAAGCAACCCAACCATCCAGCCA
ACCAGCCCCTCTATCACCCCTCCCTACACATTCAGACAAGACCGCTCCAG
CAACACAACAACACTAACTCAAGCCCACAGACCAAAGCGGCCGCCGCATC
GCCATTCTGGGCACCATCGACGGCCAACAAGGCATTTTAATTGCTGAACG
CGCCGCCTTTGCGACCGAAACCCCCGAAGCCCTACAAGCCTTCCACGCCG
CCATCACCGATGTCAACAACCTCGGCGACAACGACATCTACCGATGGTAC
CTAGCCTCTTCGCACTCAGCACCAGGAAGCCAACAACCCCCGGACCTCAA
GATAAACCTCATCTGGCCCTGCACTGAGTCGCACATCAAGAAGTACTCCG
AGCAAGTTGTTCGCATGGTCACCGAGACACCGGAGATATACCGCGACTCT
ATTCGTCCGTACATGAGCGCGAAGCGCGAGGAAGGGCGACTGAATTGGGT
ATTTAATATTCTTGAGGGTCGGACGGAGCAAGAGGACGTGATTCTTCGGG
ACAAGGGACATGATGGGAATGAAGAGGGAGGGTTCTTGGTGTTGCCGGAT
TTGAACTGGGATCGGAAGACGATGGGATCGTTGCATTTGCTAGCGCTGGT
TATGAGGAGGGATATTTGGTCCTTGAGGGATCTAAAGAAGAAACATATCC
CTTGGTTGAAGTATCTGAGGGAGAGGCTGTTGGAGGAGACGGTTAGGGTG
TATCCCCAGTTGGAGACGGATCAGTTGAAACTTTATGTGCACTGTAAGTC
TCCCTTTCTGGCGCTATGGGTTTGGGGGTATTTGGTTACTGATTTGGATG
TGTCGTATAGATCAACCGACGTATTATCATTTCCATGTGCACATTGTGAA
CGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTCGGAT
TGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGACGAAGAGGCT
GGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTGAACT
CTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCGCTGCCGA
ACTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:2796868..2798022- >ATCC64974_51600-T1 ID=ATCC64974_51600-T1|Name=ATCC64974_51600-T1|organism=Aspergillus niger N402|type=CDS|length=2907bp|location=Sequence derived from alignment at OGUI01000007.1:2796868..2798022- (Aspergillus niger N402) ATCAACCGACGTATTATCATTTCCATGTGCACATTGTGAACGTCATGCTC GAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTCGGATTGGAGAACAT CATCTCGCAGTTGGAGACACTGGATGGAGACGAAGAGGCTGGAATGGCGG ATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTGAACTCTGGTCGAAT GTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCGCTGCCGAACTGACCCAC AGACCAAAGCGGCCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAAC AAGGCATTTTAATTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAA GCCCTACAAGCCTTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGA CAACGACATCTACCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAA GCCAACAACCCCCGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAG TCGCACATCAAGAAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGAC ACCGGAGATATACCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCG AGGAAGGGCGACTGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAG CAAGAGGACGTGATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGG AGGGTTCTTGGTGTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGAT CGTTGCATTTGCTAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGG GATCTAAAGAAGAAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCT GTTGGAGGAGACGGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGA AACTTTATGTGCACTATGTCCACCAACGATGTGAAGGCCTCACCGGAGGC ACTCATCTCGAAATTCGAGATCAACCGACGTATTATCATTTCCATGTGCA CATTGTGAACGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGG CGTTCGGATTGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGAC GAAGAGGCTGGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGC CAGTGAACTCTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGC CGCTGCCGAACTGACCCACAGACCAAAGCGGCCGCCGCATCGCCATTCTG GGCACCATCGACGGCCAACAAGGCATTTTAATTGCTGAACGCGCCGCCTT TGCGACCGAAACCCCCGAAGCCCTACAAGCCTTCCACGCCGCCATCACCG ATGTCAACAACCTCGGCGACAACGACATCTACCGATGGTACCTAGCCTCT TCGCACTCAGCACCAGGAAGCCAACAACCCCCGGACCTCAAGATAAACCT CATCTGGCCCTGCACTGAGTCGCACATCAAGAAGTACTCCGAGCAAGTTG TTCGCATGGTCACCGAGACACCGGAGATATACCGCGACTCTATTCGTCCG TACATGAGCGCGAAGCGCGAGGAAGGGCGACTGAATTGGGTATTTAATAT TCTTGAGGGTCGGACGGAGCAAGAGGACGTGATTCTTCGGGACAAGGGAC ATGATGGGAATGAAGAGGGAGGGTTCTTGGTGTTGCCGGATTTGAACTGG GATCGGAAGACGATGGGATCGTTGCATTTGCTAGCGCTGGTTATGAGGAG GGATATTTGGTCCTTGAGGGATCTAAAGAAGAAACATATCCCTTGGTTGA AGTATCTGAGGGAGAGGCTGTTGGAGGAGACGGTTAGGGTGTATCCCCAG TTGGAGACGGATCAGTTGAAACTTTATGTGCACTATGTCCACCAACGATG TGAAGGCCTCACCGGAGGCACTCATCTCGAAATTCGAGATCAACCGACGT ATTATCATTTCCATGTGCACATTGTGAACGTCATGCTCGAGGCGGGTGCA ACTCAGGCGACTGGAAAGGCGTTCGGATTGGAGAACATCATCTCGCAGTT GGAGACACTGGATGGAGACGAAGAGGCTGGAATGGCGGATGTCAGCTTAA CTTATTTCCTGGGTGAAGCCAGTGAACTCTGGTCGAATGTGTTCGGGCCA CTGAAGCGGGGAGAGAAGCCGCTGCCGAACTGACCCACAGACCAAAGCGG CCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAACAAGGCATTTTAA TTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAAGCCCTACAAGCC TTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGACAACGACATCTA CCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAAGCCAACAACCCC CGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAGTCGCACATCAAG AAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGACACCGGAGATATA CCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCGAGGAAGGGCGAC TGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAGCAAGAGGACGTG ATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGGAGGGTTCTTGGT GTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGATCGTTGCATTTGC TAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGGGATCTAAAGAAG AAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCTGTTGGAGGAGAC GGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGAAACTTTATGTGC ACTATGTCCACCAACGATGTGAAGGCCTCACCGGAGGCACTCATCTCGAA ATTCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA |
Vocabulary: Molecular Function
Term | Definition |
GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_51600-T1 | ATCC64974_51600-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR011145 |
DBxref | InterPro:IPR008594 |
DBxref | InterPro:IPR036265 |
DBxref | PFAM:PF11969 |
DBxref | PFAM:PF05652 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000007.1 | supercontig | OGUI01000007.1:2796868..2798022 - |
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