You are here

Home

ATCC64974_51980-T1, ATCC64974_51980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_51980-T1
Unique NameATCC64974_51980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2900472..2902151-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_51980-T1 ID=ATCC64974_51980-T1|Name=ATCC64974_51980-T1|organism=Aspergillus niger N402|type=mRNA|length=1680bp|location=Sequence derived from alignment at OGUI01000007.1:2900472..2902151- (Aspergillus niger N402)
ATGGTCAAGAGCTATATCGCAGATGCCCGCACTGTGATCTTGGCTGTGCT
CCCGAGCAATGTCGATCTTGCAACCCAGGAGATCCTCAAGCTGGCTAAAG
ATTATGACGAAAATGGAGAACGTACCCTTGGTGTGCTGACCAAACCCGAT
TTGGTGATTGAGCAAAGCGCTAAGGCAGCTTTGTGCTCACTGGTCCTGGG
GCACAAGAGACCGCTGACACTGGGATACTACTTGGTGAGAAACCAGGGCG
CCGATAAAAACACTTCTTTCGATGGCGAGGAAGGAGAGAGAATGTTTGAC
AGCCAGCCTTGGAGTTCCTTGCCGAGAGACCGTATTGGCATCCAGGCCCT
ACGAGAACGGCTAGGAGAACTACTGAGCGAAGTTACGGAGCGCGAATTCC
CTGAATTGCGTAAAGACATCAAAAATCAGATTGATACATGCCATCAAGAT
CTGGACCGCCTGGGACCTGCACGCCAGACTGAACAGGAACAGCGTGCATT
TCTGAGTGGTATAGCTCGCCAGTTTCAGATCCTCGCACGAGCTGCACGTG
ATGCTCATTATACAGAAAATGAAGCATTTGCAGAGAGCGACCTCAGGCTT
CTCACGCACATTGTCAATTTTTCTGATAGCTCAACTTTCCGGGCCAAAGC
CCATCTTTACTCATTCGACTGCCCTACCTCAGATGCAGCCGACAATGACC
AAGCAGACAACGGCACGAACAACAAACCGCACGGGAAGAGTCAAAGCGAT
AAATGGGGCCCAAGGTGGAAAGCCAACATGCACGCCCAGCCGACAGCCGA
AGATCGCTTTTGTCTGGCTCAAAATTCAAGCGAAACCTGGAAAAGCCTGG
ACCCTAGCAACTTCCCGGAGTTAGAGCCGATTGTCAGCCGCCTGGAGGGC
CCCGAAGATCCTAAAGGGGATATCAAAGCTTGGATTGAAGTGTTATATTC
TAATTCACGTGGTCTTGATCTTGGGACCTTTGGCAACAACATTTTCTGCA
ACGCTTTCAAGGAGCATGCCGGCAAATGGGAAGCCATGACCCGCGAACAC
GTGAGTAATGTTATTATGGTGGTTCACCGTTTCCTGAGTACGGCATTGGG
AAAGATTTGCGGAAGCAAACAGCTCTATAACAAGATTTGGTCCAGCATTC
TCGATGAACTTCTGAAAAGATACGAGATGGCCATGTCACAGGCGCTGTTC
CTTTTGTCGGTTGAAAGAAATCGCCGACCATATACACTGAACAATTATTT
TAATCAGACCCTCCAGAAACTGCGCAGCGCCCGTGTAGCTCAGGCATTAG
AGGACAATGCTATGGTTGACAGCGACACTTGGACTACCGGATCAGCGAAG
ATAGTCGATCTGAATGCTGTCAAGAAGACTGTCAGCGACCAGGCGAATGT
GGAACATATCACTGGGGAAATCCATGACATCCTGTGGTCCTACTACCAAG
TCGCACGCGAAAGATTTGTGGATAATGTCCACATGCAAGCAATCGAGCAT
TGTCTTCTGACCGGTCCTGAGAGCCCCCTTGAAGTTTTTAGCCAGGAATG
GGTGATCAATCTGGAGCCGGAAGAGCTGGCAGCAATCGCGGGTGAATCGC
AGGCGACCAAAGCACGGCGTACCGGCCTGAAGCAAAAGATGGAGGATTTG
AAGTCTGCTCTACAAACCTTGAAATTCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2900472..2902151-

>ATCC64974_51980-T1 ID=ATCC64974_51980-T1|Name=ATCC64974_51980-T1|organism=Aspergillus niger N402|type=CDS|length=1680bp|location=Sequence derived from alignment at OGUI01000007.1:2900472..2902151- (Aspergillus niger N402)
ATGGTCAAGAGCTATATCGCAGATGCCCGCACTGTGATCTTGGCTGTGCT
CCCGAGCAATGTCGATCTTGCAACCCAGGAGATCCTCAAGCTGGCTAAAG
ATTATGACGAAAATGGAGAACGTACCCTTGGTGTGCTGACCAAACCCGAT
TTGGTGATTGAGCAAAGCGCTAAGGCAGCTTTGTGCTCACTGGTCCTGGG
GCACAAGAGACCGCTGACACTGGGATACTACTTGGTGAGAAACCAGGGCG
CCGATAAAAACACTTCTTTCGATGGCGAGGAAGGAGAGAGAATGTTTGAC
AGCCAGCCTTGGAGTTCCTTGCCGAGAGACCGTATTGGCATCCAGGCCCT
ACGAGAACGGCTAGGAGAACTACTGAGCGAAGTTACGGAGCGCGAATTCC
CTGAATTGCGTAAAGACATCAAAAATCAGATTGATACATGCCATCAAGAT
CTGGACCGCCTGGGACCTGCACGCCAGACTGAACAGGAACAGCGTGCATT
TCTGAGTGGTATAGCTCGCCAGTTTCAGATCCTCGCACGAGCTGCACGTG
ATGCTCATTATACAGAAAATGAAGCATTTGCAGAGAGCGACCTCAGGCTT
CTCACGCACATTGTCAATTTTTCTGATAGCTCAACTTTCCGGGCCAAAGC
CCATCTTTACTCATTCGACTGCCCTACCTCAGATGCAGCCGACAATGACC
AAGCAGACAACGGCACGAACAACAAACCGCACGGGAAGAGTCAAAGCGAT
AAATGGGGCCCAAGGTGGAAAGCCAACATGCACGCCCAGCCGACAGCCGA
AGATCGCTTTTGTCTGGCTCAAAATTCAAGCGAAACCTGGAAAAGCCTGG
ACCCTAGCAACTTCCCGGAGTTAGAGCCGATTGTCAGCCGCCTGGAGGGC
CCCGAAGATCCTAAAGGGGATATCAAAGCTTGGATTGAAGTGTTATATTC
TAATTCACGTGGTCTTGATCTTGGGACCTTTGGCAACAACATTTTCTGCA
ACGCTTTCAAGGAGCATGCCGGCAAATGGGAAGCCATGACCCGCGAACAC
GTGAGTAATGTTATTATGGTGGTTCACCGTTTCCTGAGTACGGCATTGGG
AAAGATTTGCGGAAGCAAACAGCTCTATAACAAGATTTGGTCCAGCATTC
TCGATGAACTTCTGAAAAGATACGAGATGGCCATGTCACAGGCGCTGTTC
CTTTTGTCGGTTGAAAGAAATCGCCGACCATATACACTGAACAATTATTT
TAATCAGACCCTCCAGAAACTGCGCAGCGCCCGTGTAGCTCAGGCATTAG
AGGACAATGCTATGGTTGACAGCGACACTTGGACTACCGGATCAGCGAAG
ATAGTCGATCTGAATGCTGTCAAGAAGACTGTCAGCGACCAGGCGAATGT
GGAACATATCACTGGGGAAATCCATGACATCCTGTGGTCCTACTACCAAG
TCGCACGCGAAAGATTTGTGGATAATGTCCACATGCAAGCAATCGAGCAT
TGTCTTCTGACCGGTCCTGAGAGCCCCCTTGAAGTTTTTAGCCAGGAATG
GGTGATCAATCTGGAGCCGGAAGAGCTGGCAGCAATCGCGGGTGAATCGC
AGGCGACCAAAGCACGGCGTACCGGCCTGAAGCAAAAGATGGAGGATTTG
AAGTCTGCTCTACAAACCTTGAAATTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_51980ATCC64974_51980Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51980-T1.cdsATCC64974_51980-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51980-T1.exon1ATCC64974_51980-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_51980-T1ATCC64974_51980-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020850
DBxrefInterPro:IPR030381
DBxrefInterPro:IPR003130
DBxrefInterPro:IPR000375
DBxrefInterPro:IPR022812
DBxrefPFAM:PF02212
DBxrefPFAM:PF01031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2900472..2902151 -
Powered by Drupal