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ATCC64974_52230-T1, ATCC64974_52230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52230-T1
Unique NameATCC64974_52230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2966085..2966816+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52230-T1 ID=ATCC64974_52230-T1|Name=ATCC64974_52230-T1|organism=Aspergillus niger N402|type=mRNA|length=732bp|location=Sequence derived from alignment at OGUI01000007.1:2966085..2966816+ (Aspergillus niger N402)
ATGGCTTCTCCAAACCCCCAAACCAAAACAATCCCCCTACCTGGCCACTT
CCCCAACACCACCTCCGACGCCCAGCGCGTCTTCGATGTTCTCCAACTTG
GAGGCATCGCCATCGTCCCCACAGAAATCGGCTACGGCCTCCTAGCCTCG
TCCGTCGAGGCCATCGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCAGG
ACACGCCCATGGTCTAATCGGATCCTACGAGCTGCATCATGAACTGCACG
TTCTCGAACCCGAGAGGTTCGAAATGACGCGCGTTCTCACTCACGACCTC
GATATGGGCTTAGGCATCGTGGCTCCTTATAAAGCGGACCATCCCATTCT
GGCCAAATTTACACCGAAAACGCTAGCCAACGTGGTCAAGGATGACACGA
TAGCGATGTTTGTGGGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGCTG
AACTACGAGGCTGGACAGGTGATGGTCGGATCTAGTGCGAATCTAAGTGG
GGGAGGGCAGAAGTTCCTCGTTGAGGATATTGAGGAGGAGATTATAGAGG
TCGCGGATTTGATTGTTGATTATGGGTTGCAGAGGTATCATGTTTATGGG
AGGGCGTCGATTGTGATGGATTTTGGGGAGATGAAGGTTCTTCGTATGGG
GTCGTGCTATGAGCTTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGTGG
AGTTGCCAGAAGATCCAGTGTATAAGACTTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2966085..2966816+

>ATCC64974_52230-T1 ID=ATCC64974_52230-T1|Name=ATCC64974_52230-T1|organism=Aspergillus niger N402|type=CDS|length=732bp|location=Sequence derived from alignment at OGUI01000007.1:2966085..2966816+ (Aspergillus niger N402)
ATGGCTTCTCCAAACCCCCAAACCAAAACAATCCCCCTACCTGGCCACTT
CCCCAACACCACCTCCGACGCCCAGCGCGTCTTCGATGTTCTCCAACTTG
GAGGCATCGCCATCGTCCCCACAGAAATCGGCTACGGCCTCCTAGCCTCG
TCCGTCGAGGCCATCGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCAGG
ACACGCCCATGGTCTAATCGGATCCTACGAGCTGCATCATGAACTGCACG
TTCTCGAACCCGAGAGGTTCGAAATGACGCGCGTTCTCACTCACGACCTC
GATATGGGCTTAGGCATCGTGGCTCCTTATAAAGCGGACCATCCCATTCT
GGCCAAATTTACACCGAAAACGCTAGCCAACGTGGTCAAGGATGACACGA
TAGCGATGTTTGTGGGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGCTG
AACTACGAGGCTGGACAGGTGATGGTCGGATCTAGTGCGAATCTAAGTGG
GGGAGGGCAGAAGTTCCTCGTTGAGGATATTGAGGAGGAGATTATAGAGG
TCGCGGATTTGATTGTTGATTATGGGTTGCAGAGGTATCATGTTTATGGG
AGGGCGTCGATTGTGATGGATTTTGGGGAGATGAAGGTTCTTCGTATGGG
GTCGTGCTATGAGCTTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGTGG
AGTTGCCAGAAGATCCAGTGTATAAGACTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52230ATCC64974_52230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52230-T1.exon1ATCC64974_52230-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52230-T1.cdsATCC64974_52230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52230-T1ATCC64974_52230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR006070
DBxrefPFAM:PF01300
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2966085..2966816 +
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