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ATCC64974_52260-T1, ATCC64974_52260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52260-T1
Unique NameATCC64974_52260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2971111..2972016+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52260-T1 ID=ATCC64974_52260-T1|Name=ATCC64974_52260-T1|organism=Aspergillus niger N402|type=mRNA|length=906bp|location=Sequence derived from alignment at OGUI01000007.1:2971111..2972016+ (Aspergillus niger N402)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGGTGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGTAGGTTCCTCCGATAATTGAGTTCA
GTGATCGAAACTAAATCTACAGGCTATCAACCCCGCGAGAGATTTCGGTC
CCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTTTACCGCGGCC
AACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAGGTTGTGTCGT
CGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCGCA
TCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGCTG
CACTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2971111..2972016+

>ATCC64974_52260-T1 ID=ATCC64974_52260-T1|Name=ATCC64974_52260-T1|organism=Aspergillus niger N402|type=CDS|length=1716bp|location=Sequence derived from alignment at OGUI01000007.1:2971111..2972016+ (Aspergillus niger N402)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGGTGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGAGATTTCGG
TCCCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTTTACCGCGG
CCAACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAGGTTGTGTC
GTCGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCG
CATCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGC
TGCACTAAATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCA
TATGTCGCCGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGG
TGTCGTCGCTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTAT
CGATCAACATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCC
GACCCCGGTCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGT
CCGTCCCACTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTC
AATTTCTTGGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGC
TCCGCCATCAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAAT
CCTGAGCCCTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTG
CTGCATTCTTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGG
TCTGCAGTTCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGC
CGTCAGATTCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTA
TTGGAGCTGCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGA
GATTTCGGTCCCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTT
TACCGCGGCCAACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAG
GTTGTGTCGTCGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGAC
GGGTCGCGCATCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGC
TCTGCGGCTGCACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52260ATCC64974_52260Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52260-T1.exon1ATCC64974_52260-T1.exon1Aspergillus niger N402exon
ATCC64974_52260-T1.exon2ATCC64974_52260-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52260-T1.cdsATCC64974_52260-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52260-T1ATCC64974_52260-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2971111..2972016 +
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