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ATCC64974_52270-T1, ATCC64974_52270-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52270-T1
Unique NameATCC64974_52270-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2973451..2975335+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52270-T1 ID=ATCC64974_52270-T1|Name=ATCC64974_52270-T1|organism=Aspergillus niger N402|type=mRNA|length=1885bp|location=Sequence derived from alignment at OGUI01000007.1:2973451..2975335+ (Aspergillus niger N402)
ATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTC
CGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTA
TCGGTGACATTCCAGGTATCATCTCGAAGCTGGATTATATCAAGAATATA
GGCGTGGATATCGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGA
TATGGGCTATGATATTGCCGATTACTATAGCATTGCGGATGAGTACGGCA
CGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATG
AAGCTCCTTATGGACCTTGTGGTTAACCACACTAGTGATCAGAATGAGTG
GTTCAAACAGTCGCGCAGCTCGAAGGACAATGAGTATCGCAACTGGTATG
TTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAAC
AACTGGGTGTCGCATTTTCAGGGTGAGTTTCTTGCTTTGATTTGAAGTCA
TTCAATTTTTTGGAATAAGCTTTCTGACCCTGGCTGTAGGTAGTGCCTGG
GAATGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGA
ACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGCAAGGCGGTTCACG
ATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGAT
GTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTGAA
GGACCCTCGAACCCCGTGGCAGTGGGGAGACAAGTACTACGCCAATGGAC
CGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTAC
GATGCCTTCAGTGTTGGAGAGATGCCCTTCGTCAGAGACACCGAGGAGGT
GCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACT
TCGAGCATGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGA
AGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTT
CATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATC
AGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACA
GAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCC
GTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAAT
GGGACATGAACGAGTACAAGGACATTGACTGTCTCAACCACTGGCATCGG
TAGGCATATGTCCCTACCCGTCTATATAGGTCGATCACTAACTGCTCCTT
TAGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCC
GTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAG
TGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTG
GATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCA
ATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTTCTTGGATTGCGC
AAGAAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTTGATAA
GGATAGCCAGGAGGTCTTCGCGTATGCTCGTCAATTTGAGAACCAGAAGG
CGCTGGTTCTCACTAACTGGACTGAGAAAACATTGGAGTGGGATGCTACT
GCCAACGGCGTGAAGGGCATCAAGGATGTGCTATTGAACTCGTATGAAAG
CGCTGAAGCAGCGAAGGAGCGATTCACAGGACAGAAGTGGTCTCTACGCC
CGTATGAAGCAGTTGTTCTTTTGGTGGAGGCCTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2973451..2975335+

>ATCC64974_52270-T1 ID=ATCC64974_52270-T1|Name=ATCC64974_52270-T1|organism=Aspergillus niger N402|type=CDS|length=5292bp|location=Sequence derived from alignment at OGUI01000007.1:2973451..2975335+ (Aspergillus niger N402)
ATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTC
CGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTA
TCGGTGACATTCCAGGTATCATCTCGAAGCTGGATTATATCAAGAATATA
GGCGTGGATATCGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGA
TATGGGCTATGATATTGCCGATTACTATAGCATTGCGGATGAGTACGGCA
CGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATG
AAGCTCCTTATGGACCTTGTGGTTAACCACACTAGTGATCAGAATGAGTG
GTTCAAACAGTCGCGCAGCTCGAAGGACAATGAGTATCGCAACTGGTATG
TTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAAC
AACTGGGTGTCGCATTTTCAGGGTAGTGCCTGGGAATGGGACGAGCACAC
GGGTGAATACTACCTTCACCTCTACGCGACAGAACAGCCCGACCTCAACT
GGGAGCATCCGCCCGTCCGCAAGGCGGTTCACGATATCATGCGTTTCTGG
CTAGACAAAGGCGCGGATGGATTCCGCATGGATGTCATCAATTTCATCAG
CAAAGACCAACGGTTCCCGGATGCTCCTGTGAAGGACCCTCGAACCCCGT
GGCAGTGGGGAGACAAGTACTACGCCAATGGACCGAGATTACATGAATAT
CTCCAAGACCTGGGGAAGATTCTGAAGGAGTACGATGCCTTCAGTGTTGG
AGAGATGCCCTTCGTCAGAGACACCGAGGAGGTGCTCCGCGCTGTGCGCT
ACGATCGGAACGAGATCAACATGATTTTCAACTTCGAGCATGTGGACATT
GACCACGGAACATACGACAAATTCGAGCCTGGAAGCTGGAAGCTCACTGA
CTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTTCATGTACAACAATGATG
GGTGGAATGCTCTTTACTGGGAGAACCACGATCAGCCGCGGTCGATTGAT
CGCTATGCACAAGCAAAGGAGGAGTTCCGCACAGAAGCAGGTAAAATGCT
GGCGACGGTTCTTGCGCTGCAGTCTGGTACGCCGTTCGTGTACCAGGGTC
AGGAAATTGGAATGAGAAATGTTCCCGTTGAATGGGACATGAACGAGTAC
AAGGACATTGACTGTCTCAACCACTGGCATCGCCTTCTCAAGCACAGGCC
CGATGATATCGAAGCCCAGAAGAGCGCCCGTCAGGAATACCAAAAGAAAT
CCCGAGACAACGGCCGCACACCGGTGCAGTGGTCAAGTGCACCAAACGGT
GGGTTCACCGGTCCCAACGCAAAGCCTTGGATGTCCGTCAACCCGGACTA
TGTGCGCTTCAATGCTGAAGCGCAGGTCAATGACCCGAACTCGATCTACC
ACTACTGGGCTGCTGTTCTTGGATTGCGCAAGAAATACCTCGACATCTTT
GTCTATGGGGACTACGACTTGGTTGATAAGGATAGCCAGGAGGTCTTCGC
GTATGCTCGTCAATTTGAGAACCAGAAGGCGCTGGTTCTCACTAACTGGA
CTGAGAAAACATTGGAGTGGGATGCTACTGCCAACGGCGTGAAGGGCATC
AAGGATGTGCTATTGAACTCGTATGAAAGCGCTGAAGCAGCGAAGGAGCG
ATTCACAGGACAGAAGTGGTCTCTACGCCCGTATGAAGCAGTTGTTCTTT
TGGTGGAGGCCTAAATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGG
TGGAAGGAATGCTCCGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTC
CAACGATGATGGTATCGGTGACATTCCAGGTATCATCTCGAAGCTGGATT
ATATCAAGAATATAGGCGTGGATATCGTTTGGTTGTGTCCTTCCTATAAG
TCGCCTCAGGTGGATATGGGCTATGATATTGCCGATTACTATAGCATTGC
GGATGAGTACGGCACGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCC
ACGAGCGGGGTATGAAGCTCCTTATGGACCTTGTGGTTAACCACACTAGT
GATCAGAATGAGTGGTTCAAACAGTCGCGCAGCTCGAAGGACAATGAGTA
TCGCAACTGGTATGTTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACC
GGCACCCGCCTAACAACTGGGTGTCGCATTTTCAGGGTAGTGCCTGGGAA
TGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGAACA
GCCCGACCTCAACTGGGAGCATCCGCCCGTCCGCAAGGCGGTTCACGATA
TCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGATGTC
ATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTGAAGGA
CCCTCGAACCCCGTGGCAGTGGGGAGACAAGTACTACGCCAATGGACCGA
GATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTACGAT
GCCTTCAGTGTTGGAGAGATGCCCTTCGTCAGAGACACCGAGGAGGTGCT
CCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACTTCG
AGCATGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGAAGC
TGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTTCAT
GTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATCAGC
CGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACAGAA
GCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCCGTT
CGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAATGGG
ACATGAACGAGTACAAGGACATTGACTGTCTCAACCACTGGCATCGCCTT
CTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCCGTCAGGA
ATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAGTGGTCAA
GTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTGGATGTCC
GTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCAATGACCC
GAACTCGATCTACCACTACTGGGCTGCTGTTCTTGGATTGCGCAAGAAAT
ACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTTGATAAGGATAGC
CAGGAGGTCTTCGCGTATGCTCGTCAATTTGAGAACCAGAAGGCGCTGGT
TCTCACTAACTGGACTGAGAAAACATTGGAGTGGGATGCTACTGCCAACG
GCGTGAAGGGCATCAAGGATGTGCTATTGAACTCGTATGAAAGCGCTGAA
GCAGCGAAGGAGCGATTCACAGGACAGAAGTGGTCTCTACGCCCGTATGA
AGCAGTTGTTCTTTTGGTGGAGGCCTAAATGGCCAAATCCGCCTCCCAGA
TTCACCGCGCCTGGTGGAAGGAATGCTCCGTCTATCAGATCTGGCCTGCT
TCGTACAAGGATTCCAACGATGATGGTATCGGTGACATTCCAGGTATCAT
CTCGAAGCTGGATTATATCAAGAATATAGGCGTGGATATCGTTTGGTTGT
GTCCTTCCTATAAGTCGCCTCAGGTGGATATGGGCTATGATATTGCCGAT
TACTATAGCATTGCGGATGAGTACGGCACGGTCGCGGATGTCGAAAAGCT
CATCCAGGGGTGCCACGAGCGGGGTATGAAGCTCCTTATGGACCTTGTGG
TTAACCACACTAGTGATCAGAATGAGTGGTTCAAACAGTCGCGCAGCTCG
AAGGACAATGAGTATCGCAACTGGTATGTTTGGAAGCCGGCCAGGTATGA
TGAGCAGGGTAACCGGCACCCGCCTAACAACTGGGTGTCGCATTTTCAGG
GTAGTGCCTGGGAATGGGACGAGCACACGGGTGAATACTACCTTCACCTC
TACGCGACAGAACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGCAA
GGCGGTTCACGATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGAT
TCCGCATGGATGTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGAT
GCTCCTGTGAAGGACCCTCGAACCCCGTGGCAGTGGGGAGACAAGTACTA
CGCCAATGGACCGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTC
TGAAGGAGTACGATGCCTTCAGTGTTGGAGAGATGCCCTTCGTCAGAGAC
ACCGAGGAGGTGCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACAT
GATTTTCAACTTCGAGCATGTGGACATTGACCACGGAACATACGACAAAT
TCGAGCCTGGAAGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACG
TGGCAGAAGTTCATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGA
GAACCACGATCAGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGG
AGTTCCGCACAGAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAG
TCTGGTACGCCGTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGT
TCCCGTTGAATGGGACATGAACGAGTACAAGGACATTGACTGTCTCAACC
ACTGGCATCGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAG
AGCGCCCGTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACC
GGTGCAGTGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAA
AGCCTTGGATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCG
CAGGTCAATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTTCTTGG
ATTGCGCAAGAAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGG
TTGATAAGGATAGCCAGGAGGTCTTCGCGTATGCTCGTCAATTTGAGAAC
CAGAAGGCGCTGGTTCTCACTAACTGGACTGAGAAAACATTGGAGTGGGA
TGCTACTGCCAACGGCGTGAAGGGCATCAAGGATGTGCTATTGAACTCGT
ATGAAAGCGCTGAAGCAGCGAAGGAGCGATTCACAGGACAGAAGTGGTCT
CTACGCCCGTATGAAGCAGTTGTTCTTTTGGTGGAGGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52270ATCC64974_52270Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52270-T1.exon1ATCC64974_52270-T1.exon1Aspergillus niger N402exon
ATCC64974_52270-T1.exon2ATCC64974_52270-T1.exon2Aspergillus niger N402exon
ATCC64974_52270-T1.exon3ATCC64974_52270-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52270-T1.cdsATCC64974_52270-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52270-T1ATCC64974_52270-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteCAZy:GH13_2
NoteCAZy:GH13_1
NoteCAZy:GH13_4
NoteCAZy:GH13_20
NoteCAZy:GH13_35
NoteCAZy:GH13_16
NoteCAZy:GH13_30
NoteCAZy:GH13_36
NoteCAZy:GH13
NoteCAZy:GH13_17
NoteCAZy:GH13_23
NoteCAZy:GH13_29
NoteCAZy:GH13_31
NoteCAZy:GH13_40
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR006047
DBxrefPFAM:PF00128
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2973451..2975335 +
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