You are here

Home

ATCC64974_52340-T1, ATCC64974_52340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52340-T1
Unique NameATCC64974_52340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2987016..2989588-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52340-T1 ID=ATCC64974_52340-T1|Name=ATCC64974_52340-T1|organism=Aspergillus niger N402|type=mRNA|length=2573bp|location=Sequence derived from alignment at OGUI01000007.1:2987016..2989588- (Aspergillus niger N402)
ATGCTCGCTCCGGGCTCTGGGAATGTGAGTCTCAGAACTGTCAGTTGTAA
GTTGACTCTGCATAACCTTGGCACCCAGCCAAGGAAAAGCATGATGCGTC
TTCGAATTCAGGCTGACCGATGACTGATCCCCTCACAGCTAATCGACCAC
AATTAATGCACACCCAGTCTCAACAGTCTATCGCCGCCTCCGACGACTAC
TACTCTTTCTCAAGTCCATCCTCAAGTGCAAGATCCCGAGCCAGTGGCAG
TCGACTCACCGTGGCGCGGTATGCGACACCGAACTCTCATCCTCCGTCCC
GAACATCGTCTCCTAGCATCTCTCGGACGCATCTAGCCTCGCAGCCGGCT
GGTGCACGATCGGAACATTCCTTAAACGTTCCGAGTGAGAACAGGAATTT
TGTTACACCCCCTTCTCAGACAATACGTGCAGTCGAAGAGGAAGATCCTG
AGCCCAGCCCCATGTCAGATACCACGAGTCGCCGGGAACTCAGTGACAGC
TATGCTGGGCGGCCGCCTACTCCTGGGGTGGATGACTCGCCATACATTCA
TTTTGCCATCAGCCAGCTTACGCGTGATGAGGAAGTTGCTGGGCCCAGAC
GGCGAAGCTCGCTCGCCAGTAATGACAGTCCTCTCGAGCCACTGCTTTGG
GATGAAGGATTGGGCTGCTTCATTCGCTCGCCTGGACAACCGGCAACCCC
GCCAGCACGGCAACCGCAACAATCATCCGACTCTATCGGGAGGGCGCCCC
AAAACTCGGTAGATCCAGAATCGTTCGTCGCGGTGGAACCTCCGCATGAC
AGCCTGCTGTACCCACCGTTGGACTATGTGCCTATAGTATTACGGTCATG
GGCTCTGGCTGCCATAATTATCTGTTGCCTGCTCATGATTGCTGGACTGA
GCTTCTGCAATGTATGGTCGCGGCGGCATGACGGGCTTTGGGACTATACG
GGACTAGGGGGATCCCACTACTTTGTGATGCAATTCCTACCGCAAATCTT
GGGCATGGTCATTACTATCTGGACCTTCGTGATCCAAGCGGCAGTGTATA
GAATAATGCCGTTTGCCATCATGGCTTCAGAGCGGCCGCTCGGCCACGTC
CTTCAGAGCCTGCCTATCCTATCACGGAACTTCCTGATACCGGACTTCTC
CTACTTTCGGCATGGCGAGGGCATAGTCGGTTTCTCTTTGTTCACCATGT
GGTTGTCAAACCTGATCACACTACCACTGCTAAGTTGCCTCTTCCAGGCT
AAGTGGTACTTGATCGATGGACAAGGGACGTGGCGGTGGGCCTCGGTTTC
GGCGGTTGGGTGGACCCTGGTGGCCATCTATGCGTTGTTGACCATTGGCC
TGCTCCTGCTCATGTTTCGTTTTGTACGCACATGGTCGGGGTTGATGTGG
GACCCTGTGAGTCTCGCCGACCTGATTTCAATCATCCAGCGATCGAACAT
CTTGCACGACTTTGAACAATCGGAGACTCTGCCGAATGTCGGCGAATCGC
TCGATCCGCGATTCCTCCGATTGGGCTACTGGAAACTATCAAACCGTGCG
GATATATTCTATGGAATTGGCGAGGTGGATGCACCGGTTCGGACGCCGTC
ATTACACCGAAAGGAGAAGAACCTTCAGATGCAGTCACATGGCCTGTCAA
GGGTATCATTCGACATTGAGCAGCATGGTCTCGCAGAGAAGGAAGAGTAC
TATCAGCATCTATACTCACCCGCTATCCGCTATCGTTGGATCCCATGGTT
TCTTCGCGACGGCTTTGTCGTTCTATGGACGGTAATCATTTGCGCCTTGT
TTATTGCATTCGTGTTGGTCAGCTTCATCCACGGTGCGATCAAAGACGGA
TTCCCCCCGCGTTTGCCAACACTGCCATCTACTGGTGCATTTTCCTCTTC
CAACTTTTGCTATAGCTTCGTTCCTGCTTTCATTGGGAATGTCCTCTTCC
TAGCATGGCAGCCGATCGACGTCTATTTCCGTGCGTTGCAGCCTTTTGCA
GCTCTAGCTTCCCCGACCGGTGCTCGAGCAGAACAGAGCCTTTTGTTGTC
ATACCCGTCCTGCTTTCCCTTCCAGGTGACGCTAGTGGCAGTTTTGAACA
GGCATTACAAAGTGGCCTGGATTTCATTCATGAGTACGGTGTCTGCGGCG
ATTCCTATCCTGGCCGGAGGGATGTTTATTGCCTTGTACCATCCGTCTGA
CGGGACGATCCTGATCTCTGCTCTGATGCCTGCGTTCTATGCTATTGTGG
CCTTCTGTGCACTATACATGGTGTCTTTCCTGTGCATTTGGCCCCGTCGC
TGCCGCCGCCTGCCACATGACATTAGCACTTTGGCTGATCAGATGAGCTT
CCTATACCAAAGCCCACTGCTCGCCGATAAAATCCTGCGCGAGCCTCGGA
GCAAGGCGGATCTGGTCACTCGATTGGTTGTCGCGCCTCCCGGAGATCGG
GAGCATTCTATGTACGGCTTTGGCATCTATGTTGGTCGAGATGGCAAGGA
GCATCTGGGAATTGATCGTTTCGACCGTCCTGGCCGGGCGGATATGTTGA
TTACTACCGGATATCTACGATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2987016..2989588-

>ATCC64974_52340-T1 ID=ATCC64974_52340-T1|Name=ATCC64974_52340-T1|organism=Aspergillus niger N402|type=CDS|length=4962bp|location=Sequence derived from alignment at OGUI01000007.1:2987016..2989588- (Aspergillus niger N402)
CTAATCGACCACAATTAATGCACACCCAGTCTCAACAGTCTATCGCCGCC
TCCGACGACTACTACTCTTTCTCAAGTCCATCCTCAAGTGCAAGATCCCG
AGCCAGTGGCAGTCGACTCACCGTGGCGCGGTATGCGACACCGAACTCTC
ATCCTCCGTCCCGAACATCGTCTCCTAGCATCTCTCGGACGCATCTAGCC
TCGCAGCCGGCTGGTGCACGATCGGAACATTCCTTAAACGTTCCGAGTGA
GAACAGGAATTTTGTTACACCCCCTTCTCAGACAATACGTGCAGTCGAAG
AGGAAGATCCTGAGCCCAGCCCCATGTCAGATACCACGAGTCGCCGGGAA
CTCAGTGACAGCTATGCTGGGCGGCCGCCTACTCCTGGGGTGGATGACTC
GCCATACATTCATTTTGCCATCAGCCAGCTTACGCGTGATGAGGAAGTTG
CTGGGCCCAGACGGCGAAGCTCGCTCGCCAGTAATGACAGTCCTCTCGAG
CCACTGCTTTGGGATGAAGGATTGGGCTGCTTCATTCGCTCGCCTGGACA
ACCGGCAACCCCGCCAGCACGGCAACCGCAACAATCATCCGACTCTATCG
GGAGGGCGCCCCAAAACTCGGTAGATCCAGAATCGTTCGTCGCGGTGGAA
CCTCCGCATGACAGCCTGCTGTACCCACCGTTGGACTATGTGCCTATAGT
ATTACGGTCATGGGCTCTGGCTGCCATAATTATCTGTTGCCTGCTCATGA
TTGCTGGACTGAGCTTCTGCAATGTATGGTCGCGGCGGCATGACGGGCTT
TGGGACTATACGGGACTAGGGGGATCCCACTACTTTGTGATGCAATTCCT
ACCGCAAATCTTGGGCATGGTCATTACTATCTGGACCTTCGTGATCCAAG
CGGCAGTGTATAGAATAATGCCGTTTGCCATCATGGCTTCAGAGCGGCCG
CTCGGCCACGTCCTTCAGAGCCTGCCTATCCTATCACGGAACTTCCTGAT
ACCGGACTTCTCCTACTTTCGGCATGGCGAGGGCATAGTCGGTTTCTCTT
TGTTCACCATGTGGTTGTCAAACCTGATCACACTACCACTGCTAAGTTGC
CTCTTCCAGGCTAAGTGGTACTTGATCGATGGACAAGGGACGTGGCGGTG
GGCCTCGGTTTCGGCGGTTGGGTGGACCCTGGTGGCCATCTATGCGTTGT
TGACCATTGGCCTGCTCCTGCTCATGTTTCGTTTTGTACGCACATGGTCG
GGGTTGATGTGGGACCCTGTGAGTCTCGCCGACCTGATTTCAATCATCCA
GCGATCGAACATCTTGCACGACTTTGAACAATCGGAGACTCTGCCGAATG
TCGGCGAATCGCTCGATCCGCGATTCCTCCGATTGGGCTACTGGAAACTA
TCAAACCGTGCGGATATATTCTATGGAATTGGCGAGGTGGATGCACCGGT
TCGGACGCCGTCATTACACCGAAAGGAGAAGAACCTTCAGATGCAGTCAC
ATGGCCTGTCAAGGGTATCATTCGACATTGAGCAGCATGGTCTCGCAGAG
AAGGAAGAGTACTATCAGCATCTATACTCACCCGCTATCCGCTATCGTTG
GATCCCATGGTTTCTTCGCGACGGCTTTGTCGTTCTATGGACGGTAATCA
TTTGCGCCTTGTTTATTGCATTCGTGTTGGTCAGCTTCATCCACGGTGCG
ATCAAAGACGGATTCCCCCCGCGTTTGCCAACACTGCCATCTACTGGTGC
ATTTTCCTCTTCCAACTTTTGCTATAGCTTCGTTCCTGCTTTCATTGGGA
ATGTCCTCTTCCTAGCATGGCAGCCGATCGACGTCTATTTCCGTGCGTTG
CAGCCTTTTGCAGCTCTAGCTTCCCCGACCGGTGCTCGAGCAGAACAGAG
CCTTTTGTTGTCATACCCGTCCTGCTTTCCCTTCCAGGTGACGCTAGTGG
CAGTTTTGAACAGGCATTACAAAGTGGCCTGGATTTCATTCATGAGTACG
GTGTCTGCGGCGATTCCTATCCTGGCCGGAGGGATGTTTATTGCCTTGTA
CCATCCGTCTGACGGGACGATCCTGATCTCTGCTCTGATGCCTGCGTTCT
ATGCTATTGTGGCCTTCTGTGCACTATACATGGTGTCTTTCCTGTGCATT
TGGCCCCGTCGCTGCCGCCGCCTGCCACATGACATTAGCACTTTGGCTGA
TCAGATGAGCTTCCTATACCAAAGCCCACTGCTCGCCGATAAAATCCTGC
GCGAGCCTCGGAGCAAGGCGGATCTGGTCACTCGATTGGTTGTCGCGCCT
CCCGGAGATCGGGAGCATTCTATGTACGGCTTTGGCATCTATGTTGGTCG
AGATGGCAAGGAGCATCTGGGAATTGATCGTTTCGACCGTCCTGGCCGGG
CGGATATGTTGATTACTACCGGATATCTACGATAGATGCTCGCTCCGGGC
TCTGGGAATGTGAGTCTCAGAACTGTCAGTTCTAATCGACCACAATTAAT
GCACACCCAGTCTCAACAGTCTATCGCCGCCTCCGACGACTACTACTCTT
TCTCAAGTCCATCCTCAAGTGCAAGATCCCGAGCCAGTGGCAGTCGACTC
ACCGTGGCGCGGTATGCGACACCGAACTCTCATCCTCCGTCCCGAACATC
GTCTCCTAGCATCTCTCGGACGCATCTAGCCTCGCAGCCGGCTGGTGCAC
GATCGGAACATTCCTTAAACGTTCCGAGTGAGAACAGGAATTTTGTTACA
CCCCCTTCTCAGACAATACGTGCAGTCGAAGAGGAAGATCCTGAGCCCAG
CCCCATGTCAGATACCACGAGTCGCCGGGAACTCAGTGACAGCTATGCTG
GGCGGCCGCCTACTCCTGGGGTGGATGACTCGCCATACATTCATTTTGCC
ATCAGCCAGCTTACGCGTGATGAGGAAGTTGCTGGGCCCAGACGGCGAAG
CTCGCTCGCCAGTAATGACAGTCCTCTCGAGCCACTGCTTTGGGATGAAG
GATTGGGCTGCTTCATTCGCTCGCCTGGACAACCGGCAACCCCGCCAGCA
CGGCAACCGCAACAATCATCCGACTCTATCGGGAGGGCGCCCCAAAACTC
GGTAGATCCAGAATCGTTCGTCGCGGTGGAACCTCCGCATGACAGCCTGC
TGTACCCACCGTTGGACTATGTGCCTATAGTATTACGGTCATGGGCTCTG
GCTGCCATAATTATCTGTTGCCTGCTCATGATTGCTGGACTGAGCTTCTG
CAATGTATGGTCGCGGCGGCATGACGGGCTTTGGGACTATACGGGACTAG
GGGGATCCCACTACTTTGTGATGCAATTCCTACCGCAAATCTTGGGCATG
GTCATTACTATCTGGACCTTCGTGATCCAAGCGGCAGTGTATAGAATAAT
GCCGTTTGCCATCATGGCTTCAGAGCGGCCGCTCGGCCACGTCCTTCAGA
GCCTGCCTATCCTATCACGGAACTTCCTGATACCGGACTTCTCCTACTTT
CGGCATGGCGAGGGCATAGTCGGTTTCTCTTTGTTCACCATGTGGTTGTC
AAACCTGATCACACTACCACTGCTAAGTTGCCTCTTCCAGGCTAAGTGGT
ACTTGATCGATGGACAAGGGACGTGGCGGTGGGCCTCGGTTTCGGCGGTT
GGGTGGACCCTGGTGGCCATCTATGCGTTGTTGACCATTGGCCTGCTCCT
GCTCATGTTTCGTTTTGTACGCACATGGTCGGGGTTGATGTGGGACCCTG
TGAGTCTCGCCGACCTGATTTCAATCATCCAGCGATCGAACATCTTGCAC
GACTTTGAACAATCGGAGACTCTGCCGAATGTCGGCGAATCGCTCGATCC
GCGATTCCTCCGATTGGGCTACTGGAAACTATCAAACCGTGCGGATATAT
TCTATGGAATTGGCGAGGTGGATGCACCGGTTCGGACGCCGTCATTACAC
CGAAAGGAGAAGAACCTTCAGATGCAGTCACATGGCCTGTCAAGGGTATC
ATTCGACATTGAGCAGCATGGTCTCGCAGAGAAGGAAGAGTACTATCAGC
ATCTATACTCACCCGCTATCCGCTATCGTTGGATCCCATGGTTTCTTCGC
GACGGCTTTGTCGTTCTATGGACGGTAATCATTTGCGCCTTGTTTATTGC
ATTCGTGTTGGTCAGCTTCATCCACGGTGCGATCAAAGACGGATTCCCCC
CGCGTTTGCCAACACTGCCATCTACTGGTGCATTTTCCTCTTCCAACTTT
TGCTATAGCTTCGTTCCTGCTTTCATTGGGAATGTCCTCTTCCTAGCATG
GCAGCCGATCGACGTCTATTTCCGTGCGTTGCAGCCTTTTGCAGCTCTAG
CTTCCCCGACCGGTGCTCGAGCAGAACAGAGCCTTTTGTTGTCATACCCG
TCCTGCTTTCCCTTCCAGGTGACGCTAGTGGCAGTTTTGAACAGGCATTA
CAAAGTGGCCTGGATTTCATTCATGAGTACGGTGTCTGCGGCGATTCCTA
TCCTGGCCGGAGGGATGTTTATTGCCTTGTACCATCCGTCTGACGGGACG
ATCCTGATCTCTGCTCTGATGCCTGCGTTCTATGCTATTGTGGCCTTCTG
TGCACTATACATGGTGTCTTTCCTGTGCATTTGGCCCCGTCGCTGCCGCC
GCCTGCCACATGACATTAGCACTTTGGCTGATCAGATGAGCTTCCTATAC
CAAAGCCCACTGCTCGCCGATAAAATCCTGCGCGAGCCTCGGAGCAAGGC
GGATCTGGTCACTCGATTGGTTGTCGCGCCTCCCGGAGATCGGGAGCATT
CTATGTACGGCTTTGGCATCTATGTTGGTCGAGATGGCAAGGAGCATCTG
GGAATTGATCGTTTCGACCGTCCTGGCCGGGCGGATATGTTGATTACTAC
CGGATATCTACGATAGATGCTCGCTCCGGGCTCTGGGAATGTGAGTCTCA
GAACTGTCAGTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52340ATCC64974_52340Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52340-T1ATCC64974_52340-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52340-T1.cdsATCC64974_52340-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52340-T1.exon2ATCC64974_52340-T1.exon2Aspergillus niger N402exon
ATCC64974_52340-T1.exon1ATCC64974_52340-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021840
DBxrefPFAM:PF11915
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2987016..2989588 -
Powered by Drupal