You are here

Home

ATCC64974_52360-T1, ATCC64974_52360-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52360-T1
Unique NameATCC64974_52360-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2996639..2998648+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52360-T1 ID=ATCC64974_52360-T1|Name=ATCC64974_52360-T1|organism=Aspergillus niger N402|type=mRNA|length=2010bp|location=Sequence derived from alignment at OGUI01000007.1:2996639..2998648+ (Aspergillus niger N402)
ATGCAGATGGAGGGTATGAGCGGGGGGACGTACTATGGCGTCTTGCATGC
CTCCGACGTTGATTTCGCCAATATCACTCAGGTCGAGACATTTCTGCATG
AGCTCAAGCATCTGGAGTATCTTCCTATCCTAGGAGCACGCTATGCAGAG
TATTTCTGGTATGGGATTATTGTTCTGCTGGTTGTGGTCGCAGTCATCAA
CAGAGTGTACTCACTTGTTCGACGCTTGAGGTGAGTCAGCATATTGGGTT
CTTCAGTGACTTGTCTCGGATATCATGCTAATAAGTGAGTCGGTGTCGCG
GAAAGGTTCCATCCAAGTATAACTCAAAATTCTTACCTTGCCAAGATCGC
CCTGTCCACTCTCTCAACCATTACAGCGCTGGCTCGAGAGCCATCTTATC
TCCAGTGGACCCCCCGTGGACTGTCACCTTGGTTCATGCTCCCGCCATTC
GGACCAATATATATCATCCTCGCATACTTCGTCTTCATTATTATTTTGGA
GTTCATCAACAACCATGTTGCAGGAGCTGGATACTGGCAGTTTCTCGGAG
TCCGCGCTGGATGGCTTGCAACCGCTCAGATTCCCCTCCTTGTAGCCCTT
GCCGGCAAAAGAAATTTGATCGGTATGCTCTGCGGCATTCCCTATGTTCG
ACTGAATATCTACCATCGCTGGGTATCTCGAGGGCTCTTGCTGCTTTCGA
CTTTCCATTTCGCCTTCCAAAACCATGGGTGGGATCTCTACCATATAAGT
AAACTGGAGTGGGACACAGATGACTGTCCCACAAAGGGCATCGCTGCCTA
CGCTTTTATCCTATGGATGAACCTCACAACATTAGCTCCCTTCCGACACA
TGAGCTACGAGTTCTTCGTCGTACAACACATCATCACGTTCTTCGGTTTC
ATCATCGCGCTCTCCTATCATCTGGACACAGGTCCAGCCCCCAACGCTCA
ACGGTACATCTACGTCACCGCCGGTATTTACGTCGCGGGTTTGATCCTGC
GATTCGTCTACTACAGCTATATCAACTCCCGTCCCGCACGAGCCACAGTA
GAACCCCTAGAAGGCGGGGCGACCAAGGTCCGAATCACAGCTCGGAAGAT
CCGTAATTGGAAGCCCGGATCACATATCCTTCTATCACTCCCGCGACTAG
GGTTCCAGCTCTCACACCCAGCAACCATCTCATCCATACCATCATCACAC
GATGGCGAACTCGTCCTCATCCTAAAAGCCCACAAGGGCTTCACAAGAAA
GTTGATCAACACAGCAGAGGCCATCACCAACGGCCCCAAAGATGCCGAAT
CCACACAAACAAAGCGCTCATACACGGCCCTAATCGACGGCCCCTACGCA
AGCTCCTCTCCAGACTTCACATCTTTCGATTCCGTCTTGTTCCTCGCAGG
TGGCACAGGTGTGACATTCACTCTATCCCAACTCCTCCACGTCGCACACC
GTTCCACAGACGGGTCGTTGCCTCTCCGCCAAGTCCTCTTCATCTGGGTA
ATCAAGGAAAGCCGCCAAGCGTCATGGGCCTTGGCCGAGCTTGAAGCCGC
GATGCAGAAGCTGCAGAACACAAACATTCAAATCCGCGTCAAGATATTCG
TCACCCAGGACTCTGTTTGCCTCCCAGACATCAAGAACAATGATGAAAAA
CAAACCTGTGCCTGCACAAATCCCTGCCTCTGCACGCCCAACAACAATTA
TGCCGACGACACCGACGACATCGATAAAATCGAGCAAATAACCCCTTCTT
CTCCCTGCACGGAGCCAGATTCGGTCCTCGAATCCTCTGGACCGCCCAAG
GTCTCCTTCCAGCAGGGAAGACCTTCGTTTGACGGTTACATTGAGGACGC
AGTCTTGCAGGCGAAGGGGGAAATAGCTGTTGCTGTTTGCGGACCCATTG
GGCTAACCGTTTCTGTGCGACAGGCGGTTGTCCGAGTGTCGGATCATCTG
GCTGTTTGTAAAGGGTCTGGGTTGCCGGGGGTGTTTTTGCATGTGGAGAA
TGTGTGTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:2996639..2998648+

>ATCC64974_52360-T1 ID=ATCC64974_52360-T1|Name=ATCC64974_52360-T1|organism=Aspergillus niger N402|type=CDS|length=3870bp|location=Sequence derived from alignment at OGUI01000007.1:2996639..2998648+ (Aspergillus niger N402)
ATGCAGATGGAGGGTATGAGCGGGGGGACGTACTATGGCGTCTTGCATGC
CTCCGACGTTGATTTCGCCAATATCACTCAGGTCGAGACATTTCTGCATG
AGCTCAAGCATCTGGAGTATCTTCCTATCCTAGGAGCACGCTATGCAGAG
TATTTCTGGTATGGGATTATTGTTCTGCTGGTTGTGGTCGCAGTCATCAA
CAGAGTGTACTCACTTGTTCGACGCTTGAGGTTCCATCCAAGTATAACTC
AAAATTCTTACCTTGCCAAGATCGCCCTGTCCACTCTCTCAACCATTACA
GCGCTGGCTCGAGAGCCATCTTATCTCCAGTGGACCCCCCGTGGACTGTC
ACCTTGGTTCATGCTCCCGCCATTCGGACCAATATATATCATCCTCGCAT
ACTTCGTCTTCATTATTATTTTGGAGTTCATCAACAACCATGTTGCAGGA
GCTGGATACTGGCAGTTTCTCGGAGTCCGCGCTGGATGGCTTGCAACCGC
TCAGATTCCCCTCCTTGTAGCCCTTGCCGGCAAAAGAAATTTGATCGGTA
TGCTCTGCGGCATTCCCTATGTTCGACTGAATATCTACCATCGCTGGGTA
TCTCGAGGGCTCTTGCTGCTTTCGACTTTCCATTTCGCCTTCCAAAACCA
TGGGTGGGATCTCTACCATATAAGTAAACTGGAGTGGGACACAGATGACT
GTCCCACAAAGGGCATCGCTGCCTACGCTTTTATCCTATGGATGAACCTC
ACAACATTAGCTCCCTTCCGACACATGAGCTACGAGTTCTTCGTCGTACA
ACACATCATCACGTTCTTCGGTTTCATCATCGCGCTCTCCTATCATCTGG
ACACAGGTCCAGCCCCCAACGCTCAACGGTACATCTACGTCACCGCCGGT
ATTTACGTCGCGGGTTTGATCCTGCGATTCGTCTACTACAGCTATATCAA
CTCCCGTCCCGCACGAGCCACAGTAGAACCCCTAGAAGGCGGGGCGACCA
AGGTCCGAATCACAGCTCGGAAGATCCGTAATTGGAAGCCCGGATCACAT
ATCCTTCTATCACTCCCGCGACTAGGGTTCCAGCTCTCACACCCAGCAAC
CATCTCATCCATACCATCATCACACGATGGCGAACTCGTCCTCATCCTAA
AAGCCCACAAGGGCTTCACAAGAAAGTTGATCAACACAGCAGAGGCCATC
ACCAACGGCCCCAAAGATGCCGAATCCACACAAACAAAGCGCTCATACAC
GGCCCTAATCGACGGCCCCTACGCAAGCTCCTCTCCAGACTTCACATCTT
TCGATTCCGTCTTGTTCCTCGCAGGTGGCACAGGTGTGACATTCACTCTA
TCCCAACTCCTCCACGTCGCACACCGTTCCACAGACGGGTCGTTGCCTCT
CCGCCAAGTCCTCTTCATCTGGGTAATCAAGGAAAGCCGCCAAGCGTCAT
GGGCCTTGGCCGAGCTTGAAGCCGCGATGCAGAAGCTGCAGAACACAAAC
ATTCAAATCCGCGTCAAGATATTCGTCACCCAGGACTCTGTTTGCCTCCC
AGACATCAAGAACAATGATGAAAAACAAACCTGTGCCTGCACAAATCCCT
GCCTCTGCACGCCCAACAACAATTATGCCGACGACACCGACGACATCGAT
AAAATCGAGCAAATAACCCCTTCTTCTCCCTGCACGGAGCCAGATTCGGT
CCTCGAATCCTCTGGACCGCCCAAGGTCTCCTTCCAGCAGGGAAGACCTT
CGTTTGACGGTTACATTGAGGACGCAGTCTTGCAGGCGAAGGGGGAAATA
GCTGTTGCTGTTTGCGGACCCATTGGGCTAACCGTTTCTGTGCGACAGGC
GGTTGTCCGAGTGTCGGATCATCTGGCTGTTTGTAAAGGGTCTGGGTTGC
CGGGGGTGTTTTTGCATGTGGAGAATGTGTGTTGAATGCAGATGGAGGGT
ATGAGCGGGGGGACGTACTATGGCGTCTTGCATGCCTCCGACGTTGATTT
CGCCAATATCACTCAGGTCGAGACATTTCTGCATGAGCTCAAGCATCTGG
AGTATCTTCCTATCCTAGGAGCACGCTATGCAGAGTATTTCTGGTATGGG
ATTATTGTTCTGCTGGTTGTGGTCGCAGTCATCAACAGAGTGTACTCACT
TGTTCGACGCTTGAGGTTCCATCCAAGTATAACTCAAAATTCTTACCTTG
CCAAGATCGCCCTGTCCACTCTCTCAACCATTACAGCGCTGGCTCGAGAG
CCATCTTATCTCCAGTGGACCCCCCGTGGACTGTCACCTTGGTTCATGCT
CCCGCCATTCGGACCAATATATATCATCCTCGCATACTTCGTCTTCATTA
TTATTTTGGAGTTCATCAACAACCATGTTGCAGGAGCTGGATACTGGCAG
TTTCTCGGAGTCCGCGCTGGATGGCTTGCAACCGCTCAGATTCCCCTCCT
TGTAGCCCTTGCCGGCAAAAGAAATTTGATCGGTATGCTCTGCGGCATTC
CCTATGTTCGACTGAATATCTACCATCGCTGGGTATCTCGAGGGCTCTTG
CTGCTTTCGACTTTCCATTTCGCCTTCCAAAACCATGGGTGGGATCTCTA
CCATATAAGTAAACTGGAGTGGGACACAGATGACTGTCCCACAAAGGGCA
TCGCTGCCTACGCTTTTATCCTATGGATGAACCTCACAACATTAGCTCCC
TTCCGACACATGAGCTACGAGTTCTTCGTCGTACAACACATCATCACGTT
CTTCGGTTTCATCATCGCGCTCTCCTATCATCTGGACACAGGTCCAGCCC
CCAACGCTCAACGGTACATCTACGTCACCGCCGGTATTTACGTCGCGGGT
TTGATCCTGCGATTCGTCTACTACAGCTATATCAACTCCCGTCCCGCACG
AGCCACAGTAGAACCCCTAGAAGGCGGGGCGACCAAGGTCCGAATCACAG
CTCGGAAGATCCGTAATTGGAAGCCCGGATCACATATCCTTCTATCACTC
CCGCGACTAGGGTTCCAGCTCTCACACCCAGCAACCATCTCATCCATACC
ATCATCACACGATGGCGAACTCGTCCTCATCCTAAAAGCCCACAAGGGCT
TCACAAGAAAGTTGATCAACACAGCAGAGGCCATCACCAACGGCCCCAAA
GATGCCGAATCCACACAAACAAAGCGCTCATACACGGCCCTAATCGACGG
CCCCTACGCAAGCTCCTCTCCAGACTTCACATCTTTCGATTCCGTCTTGT
TCCTCGCAGGTGGCACAGGTGTGACATTCACTCTATCCCAACTCCTCCAC
GTCGCACACCGTTCCACAGACGGGTCGTTGCCTCTCCGCCAAGTCCTCTT
CATCTGGGTAATCAAGGAAAGCCGCCAAGCGTCATGGGCCTTGGCCGAGC
TTGAAGCCGCGATGCAGAAGCTGCAGAACACAAACATTCAAATCCGCGTC
AAGATATTCGTCACCCAGGACTCTGTTTGCCTCCCAGACATCAAGAACAA
TGATGAAAAACAAACCTGTGCCTGCACAAATCCCTGCCTCTGCACGCCCA
ACAACAATTATGCCGACGACACCGACGACATCGATAAAATCGAGCAAATA
ACCCCTTCTTCTCCCTGCACGGAGCCAGATTCGGTCCTCGAATCCTCTGG
ACCGCCCAAGGTCTCCTTCCAGCAGGGAAGACCTTCGTTTGACGGTTACA
TTGAGGACGCAGTCTTGCAGGCGAAGGGGGAAATAGCTGTTGCTGTTTGC
GGACCCATTGGGCTAACCGTTTCTGTGCGACAGGCGGTTGTCCGAGTGTC
GGATCATCTGGCTGTTTGTAAAGGGTCTGGGTTGCCGGGGGTGTTTTTGC
ATGTGGAGAATGTGTGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52360ATCC64974_52360Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52360-T1.exon1ATCC64974_52360-T1.exon1Aspergillus niger N402exon
ATCC64974_52360-T1.exon2ATCC64974_52360-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52360-T1.cdsATCC64974_52360-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52360-T1ATCC64974_52360-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR039261
DBxrefInterPro:IPR017927
DBxrefInterPro:IPR013130
DBxrefInterPro:IPR013112
DBxrefInterPro:IPR013121
DBxrefPFAM:PF08030
DBxrefPFAM:PF01794
DBxrefPFAM:PF08022
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2996639..2998648 +
Powered by Drupal