You are here

Home

ATCC64974_52620-T1, ATCC64974_52620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52620-T1
Unique NameATCC64974_52620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3076938..3078432-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52620-T1 ID=ATCC64974_52620-T1|Name=ATCC64974_52620-T1|organism=Aspergillus niger N402|type=mRNA|length=1495bp|location=Sequence derived from alignment at OGUI01000007.1:3076938..3078432- (Aspergillus niger N402)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGTAGG
TGATTCCCGGTGTTTTATCAGCATCGATAGTGGTTGGTTCCCGCATCTGG
ATGGCTAACTGGCCGCAGGGATATCCAAGTATTGAAGACCTACGGTGCCG
CTCCCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGA
CAAGCGAGTGTAAACGAGAAGATTGGCGTCAAGGTATTGAGGTCTGCGAT
ATACGTCATACCGGACACGTCTGACTAGCTGCTTAGGAATCCGATACCGG
TCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGG
CAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGAT
GAGAAGGACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGC
CAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAG
AGGGCATGAGAGTCGGGTATGACCCTGCAGCTTTGCTATGCATCTTCCCA
TCTAACAGATGACAGTGTCGACCGCAATAAATACCAGATTATGCTACCTC
TCCCTCCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAG
CCCGATGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAA
GTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTA
ACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGA
ACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTAC
GTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGG
GTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCG
TGCATTATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGA
CGACGGAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGA
TTACGCAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTC
GCTACCAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCG
TATCGACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCA
ACATTCTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGG
TGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCG
GAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGG
TGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGT
AACCTGAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3076938..3078432-

>ATCC64974_52620-T1 ID=ATCC64974_52620-T1|Name=ATCC64974_52620-T1|organism=Aspergillus niger N402|type=CDS|length=5280bp|location=Sequence derived from alignment at OGUI01000007.1:3076938..3078432- (Aspergillus niger N402)
TGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCG
ACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTAC
GGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGT
CGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACC
CGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTT
TGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCAT
TGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCC
GTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTC
GACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGG
TGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATG
GTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCG
TCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGAT
CGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTC
ACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCG
CGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGA
GGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGG
ACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAAC
TCGACGGCGACGTACATGCAGTATAATTAGGAATCCGATACCGGTCTTGC
GCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGG
AGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAG
GACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTT
TGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCA
TGAGAGTCGGGGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTAC
GCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAG
TGTAAACGAGAAGATTGGCGTCAAGATGCCTAGCGCCACGGGAGAGAACT
GGGAGAAGTACAAGAAGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAG
ATCACCCCTCTTACAGACGATGTCGACCGCAATAAATACCAGATTATGCT
ACCTCTCCCTCCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGG
ACAAGCCCGATGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATT
GAGAAGTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTT
CGTTAACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTC
CCGGAACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGAC
GCTACGTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGG
TGAGGGTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGA
AGGCGTGCATTATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGT
TTCGACGACGGAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGA
GTTGATTACGCAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCA
TGTTCGCTACCAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCT
GGTCGTATCGACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCG
TGCCAACATTCTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACA
TTCGGTGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAG
CTCCGGAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCG
GAAGGTGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCA
AGGGTAACCTGAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAG
GAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGA
CCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAA
AGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATATGTTATCAAC
GTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCC
TACGGATATCGAAGAGGGCATGAGAGTCGGGGATATCCAAGTATTGAAGA
CCTACGGTGCCGCTCCCTACGCCACGGCATTAAAGAAGCTCGAAAAACAG
ATCAAGGACAGACAAGCGAGTGTAAACGAGAAGATTGGCGTCAAGATGCC
TAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATG
ACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGATGTCGACCGC
AATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGT
GACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCG
GAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCA
TTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGG
TGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAG
CCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAG
TTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTT
CGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCG
ATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAA
GTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGC
ACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGG
ACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGATCGAGTTCTCG
CTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAG
CATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCC
CGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATG
TTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGC
CGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGA
CGTACATGCAGTATAATTAGGAATCCGATACCGGTCTTGCGCCTCCACAC
CTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCT
GCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATA
AGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAAC
CTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGG
GGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCACGGCAT
TAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAAACGAG
AAGATTGGCGTCAAGATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTA
CAAGAAGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCACCCCTC
TTACAGACGATGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCT
CCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGA
TGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGC
GAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTC
GGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGG
TAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCA
TCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCT
CGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCAT
TATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACG
GAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACG
CAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTAC
CAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCG
ACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATT
CTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGA
GCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTG
TTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCC
ACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCT
GAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAGGAATCCGATA
CCGGTCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGC
ATGGCAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTC
GGATGAGAAGGACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGA
TCGCCAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATC
GAAGAGGGCATGAGAGTCGGGGATATCCAAGTATTGAAGACCTACGGTGC
CGCTCCCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACA
GACAAGCGAGTGTAAACGAGAAGATTGGCGTCAAGATGCCTAGCGCCACG
GGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATGACGAAGAGCC
AGAGAAGAAGATCACCCCTCTTACAGACGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT1ATCC64974_52620Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52620-T1ATCC64974_52620-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52620-T1.cdsATCC64974_52620-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52620-T1.exon4ATCC64974_52620-T1.exon4Aspergillus niger N402exon
ATCC64974_52620-T1.exon3ATCC64974_52620-T1.exon3Aspergillus niger N402exon
ATCC64974_52620-T1.exon2ATCC64974_52620-T1.exon2Aspergillus niger N402exon
ATCC64974_52620-T1.exon1ATCC64974_52620-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF00004
Product26S proteasome regulatory subunit 7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3076938..3078432 -
Powered by Drupal