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ATCC64974_52760-T1, ATCC64974_52760-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52760-T1
Unique NameATCC64974_52760-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3130815..3131726-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52760-T1 ID=ATCC64974_52760-T1|Name=ATCC64974_52760-T1|organism=Aspergillus niger N402|type=mRNA|length=912bp|location=Sequence derived from alignment at OGUI01000007.1:3130815..3131726- (Aspergillus niger N402)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
AAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3130815..3131726-

>ATCC64974_52760-T1 ID=ATCC64974_52760-T1|Name=ATCC64974_52760-T1|organism=Aspergillus niger N402|type=CDS|length=912bp|location=Sequence derived from alignment at OGUI01000007.1:3130815..3131726- (Aspergillus niger N402)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
AAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52760ATCC64974_52760Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52760-T1.cdsATCC64974_52760-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52760-T1.exon1ATCC64974_52760-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52760-T1ATCC64974_52760-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092645TJ
DBxrefInterPro:IPR017923
DBxrefInterPro:IPR036575
DBxrefInterPro:IPR035441
DBxrefInterPro:IPR006289
DBxrefInterPro:IPR035100
DBxrefInterPro:IPR003618
DBxrefInterPro:IPR001222
DBxrefInterPro:IPR003617
DBxrefPFAM:PF07500
DBxrefPFAM:PF01096
DBxrefPFAM:PF08711
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3130815..3131726 -
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