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ATCC64974_52880-T1, ATCC64974_52880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52880-T1
Unique NameATCC64974_52880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3160088..3160634-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52880-T1 ID=ATCC64974_52880-T1|Name=ATCC64974_52880-T1|organism=Aspergillus niger N402|type=mRNA|length=547bp|location=Sequence derived from alignment at OGUI01000007.1:3160088..3160634- (Aspergillus niger N402)
ATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCACACTGGTGG
CCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCTTGAACGCCG
CCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTATGCTACTGGT
AACGCTGTAAGTTTAACCATATAATTCGCCCCTGGGGTTGGTTTCGAGAA
GCAGTGAGAGCGGGGTATGGTAACACACCATATAACAGGCCGGACGCTCC
GGTGCCCCCGAAGGCCAGCACCTGACCAAGGTCGACCGCAGCGACGACAT
CGTCAAGCCCAAGACCGTTGGCTACCAGGTGGCGGATGCGATCAAGAAGC
GCCGAAACGAGGACGGCTACAAGATGACTCAGAAGGAACTCGCCACTAAG
TGCAACACCACCATCACTGTTGTTCAGGACTTCGAGCGCGGTACTGCTGC
TCCGGACCAGAAGGTCCTTAGTGCCATGGAGCGCGTGCTGAACGTTAAGC
TGAGGGGTACGGGCATCGGGCAGGAGAAGTTCCCTAAGAAGAAGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3160088..3160634-

>ATCC64974_52880-T1 ID=ATCC64974_52880-T1|Name=ATCC64974_52880-T1|organism=Aspergillus niger N402|type=CDS|length=930bp|location=Sequence derived from alignment at OGUI01000007.1:3160088..3160634- (Aspergillus niger N402)
GCCGGACGCTCCGGTGCCCCCGAAGGCCAGCACCTGACCAAGGTCGACCG
CAGCGACGACATCGTCAAGCCCAAGACCGTTGGCTACCAGGTGGCGGATG
CGATCAAGAAGCGCCGAAACGAGGACGGCTACAAGATGACTCAGAAGGAA
CTCGCCACTAAGTGCAACACCACCATCACTGTTGTTCAGGACTTCGAGCG
CGGTACTGCTGCTCCGGACCAGAAGGTCCTTAGTGCCATGGAGCGCGTGC
TGAACGTTAAGCTGAGGGGTACGGGCATCGGGCAGGAGAAGTTCCCTAAG
AAGAAGTAAATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCA
CACTGGTGGCCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCT
TGAACGCCGCCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTAT
GCTACTGGTAACGCTGCCGGACGCTCCGGTGCCCCCGAAGGCCAGCACCT
GACCAAGGTCGACCGCAGCGACGACATCGTCAAGCCCAAGACCGTTGGCT
ACCAGGTGGCGGATGCGATCAAGAAGCGCCGAAACGAGGACGGCTACAAG
ATGACTCAGAAGGAACTCGCCACTAAGTGCAACACCACCATCACTGTTGT
TCAGGACTTCGAGCGCGGTACTGCTGCTCCGGACCAGAAGGTCCTTAGTG
CCATGGAGCGCGTGCTGAACGTTAAGCTGAGGGGTACGGGCATCGGGCAG
GAGAAGTTCCCTAAGAAGAAGTAAATGAGCGACTGGGACTCTGTTACGCG
CATTGGAGCCAGGCACACTGGTGGCCCTGCCACCCGCGAGACCGTCGTCA
AGGGTAAGAGCGCCTTGAACGCCGCCCAGCGTAACGGTCTCGTTATCGGT
ACTGAGAAGAAGTATGCTACTGGTAACGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MBF1ATCC64974_52880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52880-T1ATCC64974_52880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52880-T1.cdsATCC64974_52880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52880-T1.exon2ATCC64974_52880-T1.exon2Aspergillus niger N402exon
ATCC64974_52880-T1.exon1ATCC64974_52880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264MN3
DBxrefInterPro:IPR010982
DBxrefInterPro:IPR013729
DBxrefInterPro:IPR001387
DBxrefPFAM:PF08523
DBxrefPFAM:PF01381
Productmultiprotein-bridging factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3160088..3160634 -
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