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ATCC64974_52930-T1, ATCC64974_52930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52930-T1
Unique NameATCC64974_52930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3171458..3172797-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52930-T1 ID=ATCC64974_52930-T1|Name=ATCC64974_52930-T1|organism=Aspergillus niger N402|type=mRNA|length=1340bp|location=Sequence derived from alignment at OGUI01000007.1:3171458..3172797- (Aspergillus niger N402)
ATGGCGGAGACTGTACGTCACACCCCCGTTTTCCCTTTACCGATAGGTTT
CCCTCCCACATTTTCTTCATCACATTTCGCCGTGGGACCATCGACTCCCT
CCGCTTTTGCTTTCTTGAAGCACCACCTCAACCCCCGTGTTCTTTTCCCT
CTATACCCATTACCTGTTGTGCAACGCTCGGACGCGATTTTTGCGGATCG
AGCTTCACACTGGTCGACTGTCTTTTAGTGTGTCCCAGCGGTTTTTTTGG
GTTTTTAATTTCGCCCCTCCCGCTAACGTGTGTTTGGGCTGGTCCGGATT
AGCAGGTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGT
GAAGGCGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCC
GGTTGTTGAGAAGCCGGTTGCTGAGACTGAGGGTATATACCTTTCTCCCC
TCTCGACTTGTGGATATCAAATTTGATATTGACCTCTACGCATCACCTAC
AGACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAA
AGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGAGACCCCC
GCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAA
GCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCG
GTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTC
CCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGC
GCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTC
AGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATC
CCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAA
CATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCACGTTATGC
AGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGT
CGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTT
GAGAAGATACATCGGTATGTTGCTTTGCTATATGGTTATTTTTCAAATCA
ATAACGACACTAACGTTGTATAGTCGAATACGTCACCTGCAAGACCTGCC
GCAGTCCCGACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTC
ACCTGCAACTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGG
TTTCCGTGGACAGGTCGGCCGCAGAAAGAGACAGGGTTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3171458..3172797-

>ATCC64974_52930-T1 ID=ATCC64974_52930-T1|Name=ATCC64974_52930-T1|organism=Aspergillus niger N402|type=CDS|length=3684bp|location=Sequence derived from alignment at OGUI01000007.1:3171458..3172797- (Aspergillus niger N402)
TCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAAC
AAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCG
TCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCA
GAAAGAGACAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCA
AGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGC
GATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAA
GAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCA
AGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAG
AAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTG
GGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGAT
TCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACC
AAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCG
TACGATTTTCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCG
ATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGT
GTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCA
GATTGAGAACGTCTTGAGAAGATACATCGCAGGTTGAACCCGCTCCCCAA
AAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATAC
CAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTG
AGACTGAGGATGGCGGAGACTTCGAATACGTCACCTGCAAGACCTGCCGC
AGTCCCGACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCAC
CTGCAACTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTT
TCCGTGGACAGGTCGGCCGCAGAAAGAGACAGGGTTAAACAAGGCCGTCG
ACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAG
AAGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGA
GTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCG
ACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAG
GAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCA
CGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGT
ACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCC
GATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTG
TCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCT
GCAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCC
GAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAA
GGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCG
CAGGTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGA
AGGCGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGG
TTGTTGAGAAGCCGGTTGCTGAGACTGAGGATGGCGGAGACTTCGAATAC
GTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAGGGTGA
GAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCGTTCCG
TCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAAAGAGA
CAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTT
TCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGA
GACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGA
AGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCT
GAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGA
GGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACG
ACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCC
CTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTA
TAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTT
TCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCAC
GTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGG
TAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGA
ACGTCTTGAGAAGATACATCGCAGGTTGAACCCGCTCCCCAAAAACAACG
CAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATACCAACGGCG
AAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAG
GATGGCGGAGACTTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGA
CACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACT
CTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGA
CAGGTCGGCCGCAGAAAGAGACAGGGTTAAACAAGGCCGTCGACGAAGTT
ACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAA
GGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACC
CCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGC
GATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGC
CGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTG
GAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTG
CTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTT
GTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTG
AAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCTGCAAGCGC
ATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGG
TACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTT
TCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCGCAGGTTGA
ACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCTG
TCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAG
AAGCCGGTTGCTGAGACTGAGGATGGCGGAGACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52930ATCC64974_52930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52930-T1ATCC64974_52930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52930-T1.cdsATCC64974_52930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52930-T1.exon4ATCC64974_52930-T1.exon4Aspergillus niger N402exon
ATCC64974_52930-T1.exon3ATCC64974_52930-T1.exon3Aspergillus niger N402exon
ATCC64974_52930-T1.exon2ATCC64974_52930-T1.exon2Aspergillus niger N402exon
ATCC64974_52930-T1.exon1ATCC64974_52930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264OQ8
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR000048
DBxrefInterPro:IPR002735
DBxrefPFAM:PF01873
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3171458..3172797 -
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