You are here

Home

ATCC64974_52990-T1, ATCC64974_52990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_52990-T1
Unique NameATCC64974_52990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3185524..3186594+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_52990-T1 ID=ATCC64974_52990-T1|Name=ATCC64974_52990-T1|organism=Aspergillus niger N402|type=mRNA|length=1071bp|location=Sequence derived from alignment at OGUI01000007.1:3185524..3186594+ (Aspergillus niger N402)
ATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCCGTCGA
CCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGGAGCTA
CCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCGGGGTG
GAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCGGCAAA
GACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGTATGGC
AGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACCGGGTG
AACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGAATATG
GAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATTGCAGG
TCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGAAACTA
AGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTATCCAG
CCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCAGCCGT
TGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGCAGTAT
GGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCTGGTCT
TGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGTAAGCC
CTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCTACGAG
CGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCGGAGCA
AGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTCGCATG
GGAAATGTTGGCGGAGTGATGGATATCTAGAGTGAGTGCTGCTCTGCTGG
GATGGTTTCTGCGTGTCTTTGCGGCGTGTTTGCTAATATTAGGGCAGTGA
ATCTGTGGCGTTAACAACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAG
CGTGGACGGAGATCATGAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAG
GAGTCAATCAGGGGGTGGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3185524..3186594+

>ATCC64974_52990-T1 ID=ATCC64974_52990-T1|Name=ATCC64974_52990-T1|organism=Aspergillus niger N402|type=CDS|length=2010bp|location=Sequence derived from alignment at OGUI01000007.1:3185524..3186594+ (Aspergillus niger N402)
ATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCCGTCGA
CCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGGAGCTA
CCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCGGGGTG
GAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCGGCAAA
GACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGTATGGC
AGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACCGGGTG
AACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGAATATG
GAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATTGCAGG
TCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGAAACTA
AGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTATCCAG
CCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCAGCCGT
TGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGCAGTAT
GGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCTGGTCT
TGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGTAAGCC
CTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCTACGAG
CGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCGGAGCA
AGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTCGCATG
GGAAATGTTGGCGGAGTGATGGATATCTAGATGAATCTGTGGCGTTAACA
ACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAGCGTGGACGGAGATCAT
GAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAGGAGTCAATCAGGGGGT
GGTAAATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCC
GTCGACCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGG
AGCTACCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCG
GGGTGGAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCG
GCAAAGACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGT
ATGGCAGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACC
GGGTGAACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGA
ATATGGAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATT
GCAGGTCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGA
AACTAAGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTA
TCCAGCCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCA
GCCGTTGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGC
AGTATGGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCT
GGTCTTGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGT
AAGCCCTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCT
ACGAGCGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCG
GAGCAAGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTC
GCATGGGAAATGTTGGCGGAGTGATGGATATCTAGATGAATCTGTGGCGT
TAACAACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAGCGTGGACGGAG
ATCATGAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAGGAGTCAATCAG
GGGGTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_52990ATCC64974_52990Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52990-T1.exon1ATCC64974_52990-T1.exon1Aspergillus niger N402exon
ATCC64974_52990-T1.exon2ATCC64974_52990-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52990-T1.cdsATCC64974_52990-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_52990-T1ATCC64974_52990-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3185524..3186594 +
Powered by Drupal