You are here

Home

ATCC64974_5300-T1, ATCC64974_5300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5300-T1
Unique NameATCC64974_5300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1621059..1624103-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5300-T1 ID=ATCC64974_5300-T1|Name=ATCC64974_5300-T1|organism=Aspergillus niger N402|type=mRNA|length=3045bp|location=Sequence derived from alignment at OGUI01000001.1:1621059..1624103- (Aspergillus niger N402)
ATGCCCGCCCTTCAAGGGCAATCACTTGATGAGCATTTCTACAAACTGGG
TATGGATGCGTCAGAGCCATATCTCGCCTATTCCAAACAATACACTATGG
CAAACTCACCGGAGAAGCCGCGCAAATGGATAAAACGCAGTGGGTGGACA
AAGTACAACAGCGACGGGTCGTGGGAAGCGGTTGATGCACCGAATGAGTC
CATGTTGACATTCGACACCGAAGTCATGTACAAGGAGCATTCTTTTGCTG
TTATGGCTTGCGCTGTTAGTCCTACAGCTTGGTATGCTTGGATATCGCCT
TGGTTGTTAGGAGAATCGGAAAACGAAGTCCAGCTCATTCCCCTCGGAGA
CCCATCAAAGCCACGAATTGTCGTGGGCCATAATATTGGTTATGATCGCG
CTCGTGTTCTCGAGGAGTATGATATGACTCAGTCTTGCAACTTCTTTCTT
GATACCATGTCGCTTCACGTGGCTGTGAATGGTATGTGTTCACAACAGAG
GCCTACCTGGATGCGACACAAGAAGAATAGGGATTTGAGAAATAAGATCG
CAAGTGAGAGTAATTCAGTTGAGCTGGCAGCCATACTAGAAAGTAAGATG
CTCAGTGATGAGGAAGAAGAACTCTGGGTAGGGAGGAGCTCGGTGAATTC
GCTTCGCGACGTGGCCAAGTTTCATTGTGATGTTACGATCGATAAGGCGC
AACGTGACTATTTCGGTGAACTTGACAGAAATGGAATCCTGGGGAAGTTG
GAGGAACTGCTTGATTATTGTGCAGCAGATGTTGCCATTACCCATCGAGT
GTACAAGAAGGTTTTCCCTAACTTCCTTGAAGTCTGTCCGCACCCTGTCA
GCTTTGGCGCCCTTCGACATCTCTCTTCCGTCATCTTGCCAGTGAACGAG
ACATGGAAGGAGTACATCGCCAATGCGGAAGCGACCTATCACCAGCGCCT
TGAGGATGTTCAACGGAAAATGATCGAACTTTGTGAGGAAGCCCTGAAGG
TCAAAGACTCTCCGGACATCTACATGAACGATCCCTGGCTGCGGCAGTTG
GACTGGTCTGGCCAGGAGGTGAAGATGGTCAAAGGAAAAAAGAAAGGCGA
CCCTCCGCGACCAGCTGCCAGGCAGAAGAAGCCGGGTATGCCGAAGTGGT
ATAAAGATCTGTTTGCCACCAACACATCGGACATCAGCTTATCTGTGCGT
ACTCGTATCGCGCCTATACTTCTCAAACTGTCGTGGGACGGTTACCCTTT
GACATGGTCCGATAAGTATGGGTGGACTTTCAAAGTCCCGCGCGAGCTTG
TCAAGAATTATGAGAACCAGCCTGTCGTTCTGTGTGACATGTCCGAGGAG
AAGAACCCCGAATTGCAGAATGACAGAAAACACGTTTACTTCAAGCTACC
GCACAAAGATGGGCCTCAAGCGCGGTGCACAAATCCTCTGGCGAAGGGGT
ACATGCAGTACTTTGAACGTGGAACGCTCTCATCCCAGTACGCCCTCGCC
AAAGAGGCGCTAGAGATGAATGCATCCTGCTCTTACTGGATCAGTGCCCG
TGACCGTATCATGGGTCAAATGGTAGTCTACGAGGACGAAGTGCGAGGCC
TGACATCGAGTGGTAAGACAGACCACCGGCTCGGGTTCATTTTGCCACAG
ATCATCCCTATGGGAACCATCACTCGAAGAGCGGTGGAAAACACATGGCT
TACAGCCAGTAATGCAAAAGGGAACCGTGTCGGGTCTGAGCTCAAGGCTA
TGATCAAAGCTCCACCTGGCTACTCTTTTGTCGGCGCAGATGTCGACTCT
CAGGAGCTATGGATTGCCAGTCTTGTTGGAGACGCTCAATTCCAAATTCA
CGGCGGTAACGCCATTGGTTTCATGACACTGGAAGGGTCCAAGGCAGCGG
GGACGGATATGCACTCACGCACAGCCCAGATCCTGGGTATCTCACGTAAC
GATGCCAAGGTGTTCAACTATGGACGCATCTATGGAGCTGGCGTCAAGTT
CGCCGCTACTTTGCTGCGTCAGTTCAATCCGTCCATGTCGGAAAGGCAGA
CCCAGGAGGTTGCAACAAAATTATATAAAGAGACGAAGGGTACCCGTACG
ACTCGTCGTATACTCTGTGAAGGCCCTTTCTGGCGGGGCGGAACCGAGTC
GTTCGTCTTCAACAAACTAGAAGAATTCGCTGAGCAAGAGAGGCCCAGAA
CACCCACTTTAGGGGCCGGAATTACTGAAGCGCTGATGCGGCGCTTCATC
AACAAGGGAAGCTTCATGACATCAAGAATCAACTGGGCCATTCAGTCGTC
TGGCGTTGATTACCTCCATCTCTTAATTGTCGCCATGGACTACCTCATTC
GTCGCTTCAACATCGCCGCTCGTCTAGCAATCACTGTCCACGACGAAATC
AGATACCTAGTTAAAGACGAAGACAAGTATCGAGCTGCGCTGGCTTTGCA
GGTTGCCAACGTGTGGACCCGCGCGATGTTCTCTCAGCAAGTCGGAATAA
ACGACCTTCCTCAGTCCTGCGCCTACTTCTCTGCTGTGGACATTGACCAC
GTCCTGCGGAAGGAGGTTGATATGGACTGCGTGACCCCATCCCACCCGCA
CAAGATTCCCCACGGCGAGAGTCTTGACGTTGCGCAGCTTTTGGACAAGA
ATGAAAAGGCATACCTTGACCCTGCCATCATCCCCAATTCGCCACCCAAC
CCCCAGCAGTACGAGTACACGCCACGACCGTCAGTCATGTCCGCACTTCA
AACTTCTCACCCGGCCTTCATCCGCGCTCAGATCTCGAAGGACGACAACG
AACTCCGCGAAATCATCAAAGAGCTCACTAAACAAAAGTCCACACTGGCG
CCACCAAACGCGCGTTTGCCTAGCAATCGTGCAAAACCCTATGGCTCGGT
GGCAGCGGAACCACAAAAGGCCATTCTGATGGACATTGGACCCAGTCTCT
ACCCAGACTTTAAAAGCCTTCCCCAAGGGAGCCGGTCTCCCCAGGTGAGC
TTTAACCGTCAGAATTGGAAGCCGAGACCGTCTGCCCGAGCTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1621059..1624103-

>ATCC64974_5300-T1 ID=ATCC64974_5300-T1|Name=ATCC64974_5300-T1|organism=Aspergillus niger N402|type=CDS|length=3045bp|location=Sequence derived from alignment at OGUI01000001.1:1621059..1624103- (Aspergillus niger N402)
ATGCCCGCCCTTCAAGGGCAATCACTTGATGAGCATTTCTACAAACTGGG
TATGGATGCGTCAGAGCCATATCTCGCCTATTCCAAACAATACACTATGG
CAAACTCACCGGAGAAGCCGCGCAAATGGATAAAACGCAGTGGGTGGACA
AAGTACAACAGCGACGGGTCGTGGGAAGCGGTTGATGCACCGAATGAGTC
CATGTTGACATTCGACACCGAAGTCATGTACAAGGAGCATTCTTTTGCTG
TTATGGCTTGCGCTGTTAGTCCTACAGCTTGGTATGCTTGGATATCGCCT
TGGTTGTTAGGAGAATCGGAAAACGAAGTCCAGCTCATTCCCCTCGGAGA
CCCATCAAAGCCACGAATTGTCGTGGGCCATAATATTGGTTATGATCGCG
CTCGTGTTCTCGAGGAGTATGATATGACTCAGTCTTGCAACTTCTTTCTT
GATACCATGTCGCTTCACGTGGCTGTGAATGGTATGTGTTCACAACAGAG
GCCTACCTGGATGCGACACAAGAAGAATAGGGATTTGAGAAATAAGATCG
CAAGTGAGAGTAATTCAGTTGAGCTGGCAGCCATACTAGAAAGTAAGATG
CTCAGTGATGAGGAAGAAGAACTCTGGGTAGGGAGGAGCTCGGTGAATTC
GCTTCGCGACGTGGCCAAGTTTCATTGTGATGTTACGATCGATAAGGCGC
AACGTGACTATTTCGGTGAACTTGACAGAAATGGAATCCTGGGGAAGTTG
GAGGAACTGCTTGATTATTGTGCAGCAGATGTTGCCATTACCCATCGAGT
GTACAAGAAGGTTTTCCCTAACTTCCTTGAAGTCTGTCCGCACCCTGTCA
GCTTTGGCGCCCTTCGACATCTCTCTTCCGTCATCTTGCCAGTGAACGAG
ACATGGAAGGAGTACATCGCCAATGCGGAAGCGACCTATCACCAGCGCCT
TGAGGATGTTCAACGGAAAATGATCGAACTTTGTGAGGAAGCCCTGAAGG
TCAAAGACTCTCCGGACATCTACATGAACGATCCCTGGCTGCGGCAGTTG
GACTGGTCTGGCCAGGAGGTGAAGATGGTCAAAGGAAAAAAGAAAGGCGA
CCCTCCGCGACCAGCTGCCAGGCAGAAGAAGCCGGGTATGCCGAAGTGGT
ATAAAGATCTGTTTGCCACCAACACATCGGACATCAGCTTATCTGTGCGT
ACTCGTATCGCGCCTATACTTCTCAAACTGTCGTGGGACGGTTACCCTTT
GACATGGTCCGATAAGTATGGGTGGACTTTCAAAGTCCCGCGCGAGCTTG
TCAAGAATTATGAGAACCAGCCTGTCGTTCTGTGTGACATGTCCGAGGAG
AAGAACCCCGAATTGCAGAATGACAGAAAACACGTTTACTTCAAGCTACC
GCACAAAGATGGGCCTCAAGCGCGGTGCACAAATCCTCTGGCGAAGGGGT
ACATGCAGTACTTTGAACGTGGAACGCTCTCATCCCAGTACGCCCTCGCC
AAAGAGGCGCTAGAGATGAATGCATCCTGCTCTTACTGGATCAGTGCCCG
TGACCGTATCATGGGTCAAATGGTAGTCTACGAGGACGAAGTGCGAGGCC
TGACATCGAGTGGTAAGACAGACCACCGGCTCGGGTTCATTTTGCCACAG
ATCATCCCTATGGGAACCATCACTCGAAGAGCGGTGGAAAACACATGGCT
TACAGCCAGTAATGCAAAAGGGAACCGTGTCGGGTCTGAGCTCAAGGCTA
TGATCAAAGCTCCACCTGGCTACTCTTTTGTCGGCGCAGATGTCGACTCT
CAGGAGCTATGGATTGCCAGTCTTGTTGGAGACGCTCAATTCCAAATTCA
CGGCGGTAACGCCATTGGTTTCATGACACTGGAAGGGTCCAAGGCAGCGG
GGACGGATATGCACTCACGCACAGCCCAGATCCTGGGTATCTCACGTAAC
GATGCCAAGGTGTTCAACTATGGACGCATCTATGGAGCTGGCGTCAAGTT
CGCCGCTACTTTGCTGCGTCAGTTCAATCCGTCCATGTCGGAAAGGCAGA
CCCAGGAGGTTGCAACAAAATTATATAAAGAGACGAAGGGTACCCGTACG
ACTCGTCGTATACTCTGTGAAGGCCCTTTCTGGCGGGGCGGAACCGAGTC
GTTCGTCTTCAACAAACTAGAAGAATTCGCTGAGCAAGAGAGGCCCAGAA
CACCCACTTTAGGGGCCGGAATTACTGAAGCGCTGATGCGGCGCTTCATC
AACAAGGGAAGCTTCATGACATCAAGAATCAACTGGGCCATTCAGTCGTC
TGGCGTTGATTACCTCCATCTCTTAATTGTCGCCATGGACTACCTCATTC
GTCGCTTCAACATCGCCGCTCGTCTAGCAATCACTGTCCACGACGAAATC
AGATACCTAGTTAAAGACGAAGACAAGTATCGAGCTGCGCTGGCTTTGCA
GGTTGCCAACGTGTGGACCCGCGCGATGTTCTCTCAGCAAGTCGGAATAA
ACGACCTTCCTCAGTCCTGCGCCTACTTCTCTGCTGTGGACATTGACCAC
GTCCTGCGGAAGGAGGTTGATATGGACTGCGTGACCCCATCCCACCCGCA
CAAGATTCCCCACGGCGAGAGTCTTGACGTTGCGCAGCTTTTGGACAAGA
ATGAAAAGGCATACCTTGACCCTGCCATCATCCCCAATTCGCCACCCAAC
CCCCAGCAGTACGAGTACACGCCACGACCGTCAGTCATGTCCGCACTTCA
AACTTCTCACCCGGCCTTCATCCGCGCTCAGATCTCGAAGGACGACAACG
AACTCCGCGAAATCATCAAAGAGCTCACTAAACAAAAGTCCACACTGGCG
CCACCAAACGCGCGTTTGCCTAGCAATCGTGCAAAACCCTATGGCTCGGT
GGCAGCGGAACCACAAAAGGCCATTCTGATGGACATTGGACCCAGTCTCT
ACCCAGACTTTAAAAGCCTTCCCCAAGGGAGCCGGTCTCCCCAGGTGAGC
TTTAACCGTCAGAATTGGAAGCCGAGACCGTCTGCCCGAGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005760gamma DNA polymerase complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MIP1ATCC64974_5300Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5300-T1.cdsATCC64974_5300-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5300-T1.exon1ATCC64974_5300-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5300-T1ATCC64974_5300-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092603KJ
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR019760
DBxrefInterPro:IPR041336
DBxrefInterPro:IPR001098
DBxrefInterPro:IPR002297
DBxrefPFAM:PF00476
DBxrefPFAM:PF18136
ProductDNA-directed DNA polymerase gamma mip1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1621059..1624103 -
Powered by Drupal