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ATCC64974_5340-T1, ATCC64974_5340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5340-T1
Unique NameATCC64974_5340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1630542..1631225-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5340-T1 ID=ATCC64974_5340-T1|Name=ATCC64974_5340-T1|organism=Aspergillus niger N402|type=mRNA|length=684bp|location=Sequence derived from alignment at OGUI01000001.1:1630542..1631225- (Aspergillus niger N402)
ATGTCCTCATCTTCCGGGACTCCAGCTTCTAAACCTCGTCGACGACGTGA
CAAACCTCAACTTTCGTGCATCGCATGCCGCCAGCGCAAGTCTCGATGCG
ATCGACTACAGCCATGTACCAGCTGTGTCGCACGCGGTCACTCATGCGTC
TACCTGACCCAAAAACCACCAGCATCCCTATTGCATCCTACGCCCGTTGG
AGCAGCAGCAGGACTTCATGACCGGCTGGTTCACTTGGAGCGTCTCGTCA
AGTCCTTAATGCCCGATGGAACCAACAATGACGAGGCGCGACAGCTTACT
ACCCCAGATACCACTCCCAATAGCAGTGTTCGACAAGTGCCTAGTAATGG
TGTAGTAGATACACAGTCAGATTGTGGCAGCATGCAGATCACCGATTCCG
AGCTTCAGTATGTAGCCGGTGAACACTGGGCGGCCATTCTGGACAGCATT
GCCGACTTGAAGGCGCAATGTGATCGCGAGGAACAAGTCAGGATGGCCGA
ATCTATCGATGACACGAGTGGGAAACCATCCCACTTTCGACATGCGTTGT
TGCTCTACGGATGTGAACGGGCTTCCTCAAGGGCTGAGATCATCGCCGCA
CTGCCACCCAAGGCTGCTGTTGACCGCTATATTTCGAAGTATTTTAACTA
TCTTGATCTTGTCGCTTCTGGTGAGACACCTTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1630542..1631225-

>ATCC64974_5340-T1 ID=ATCC64974_5340-T1|Name=ATCC64974_5340-T1|organism=Aspergillus niger N402|type=CDS|length=684bp|location=Sequence derived from alignment at OGUI01000001.1:1630542..1631225- (Aspergillus niger N402)
ATGTCCTCATCTTCCGGGACTCCAGCTTCTAAACCTCGTCGACGACGTGA
CAAACCTCAACTTTCGTGCATCGCATGCCGCCAGCGCAAGTCTCGATGCG
ATCGACTACAGCCATGTACCAGCTGTGTCGCACGCGGTCACTCATGCGTC
TACCTGACCCAAAAACCACCAGCATCCCTATTGCATCCTACGCCCGTTGG
AGCAGCAGCAGGACTTCATGACCGGCTGGTTCACTTGGAGCGTCTCGTCA
AGTCCTTAATGCCCGATGGAACCAACAATGACGAGGCGCGACAGCTTACT
ACCCCAGATACCACTCCCAATAGCAGTGTTCGACAAGTGCCTAGTAATGG
TGTAGTAGATACACAGTCAGATTGTGGCAGCATGCAGATCACCGATTCCG
AGCTTCAGTATGTAGCCGGTGAACACTGGGCGGCCATTCTGGACAGCATT
GCCGACTTGAAGGCGCAATGTGATCGCGAGGAACAAGTCAGGATGGCCGA
ATCTATCGATGACACGAGTGGGAAACCATCCCACTTTCGACATGCGTTGT
TGCTCTACGGATGTGAACGGGCTTCCTCAAGGGCTGAGATCATCGCCGCA
CTGCCACCCAAGGCTGCTGTTGACCGCTATATTTCGAAGTATTTTAACTA
TCTTGATCTTGTCGCTTCTGGTGAGACACCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5340ATCC64974_5340Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5340-T1.cdsATCC64974_5340-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5340-T1.exon1ATCC64974_5340-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5340-T1ATCC64974_5340-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1630542..1631225 -
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