You are here

Home

ATCC64974_53540-T1, ATCC64974_53540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_53540-T1
Unique NameATCC64974_53540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3341012..3343294-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_53540-T1 ID=ATCC64974_53540-T1|Name=ATCC64974_53540-T1|organism=Aspergillus niger N402|type=mRNA|length=2283bp|location=Sequence derived from alignment at OGUI01000007.1:3341012..3343294- (Aspergillus niger N402)
ATGGCTGCCGTTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGC
CCCCTCTGCAGCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACC
AACTCCTTCGACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACAC
GCACCTCAACCCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCAT
TGGCACCCTTTCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCG
ACGCCTGTGTGCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAAT
AAATGTTATTCGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTC
CGTGACGAGTCGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAAT
TGGACGACGCCGATGCCGAAGAAGTGGAATCTCCCAAGAGGTATGATTTC
ACCGGGGCGTCCTAAAGGCCGATCTCGGACGTCCCCTGCCCTGAATCTCA
AATCGGAACGCTAACTTGGGTACCCGCTGCCAGGCAATCTACTACTCTTC
CCCCAGCCTCCAACAAACCAGACAGCTCCTCCCGCCCTGCATTGAACAAC
CACCACATCCTCACGCCGGCCTTTTGGTTCCAATCCACTCAACATATCGG
CCTCACCACCGAACTCGAGCCCGCCCTTCTCGAATTCTTGCCCCTGGACC
AGAACAACGAAGGGTGCGTGGCCTCGTCTCGTGTGCGCAAGTTCGGTGAC
GACGGCACCTTCATGCGGGTGGTCAACACCCGTTCTCACGCGGACTCCCC
GCAAACCGCTACGCTCGATGCCATTGAAAGCCTGGTCGCCCCTTATGGCT
CCACCTTGGTGGAGAAGTTCTTCGAGCATGTCCATCCAAGCTTTCCCATC
CTCATGGAGGATAGCTTCCGCCAGTCCTACCGGGCACGGACCGGGCTGAC
GCCGTTGCTATTGTCCGCCGTCTATGTGTTGGCGTTGAAGTTCGTTGACG
TCGGCCCGGCCTCGCAGTCCGTCCGACGCCCGGATGCCGGCCGCCTGGAG
AGCACTGCCCTCAAGCTGCTGACCGAGTCGCTGCCCTATGCGTCGATGTC
GACGGTGCAAGCCGGCCTGCTGCTCATGCAGCGGTCCAACCTCGCCACGG
CGGCCTTGAACGCACAATTGGTGACCGCCGGGTTCGAGCTGGGCCTGCAC
CAAGACTGCTCTAGTTGGCGGATGGAAACGTGGGAGAAGGGTCTCCGGAA
ACGCTTGGCATGGGCACTATATATGCAGGACAAATGGTCCGCTTTGGTGC
ATGGTCGTCCGTCCCATATCGTGTCGTCCAATTGGATGGTCCAGGACCTG
GTGGAACAGGATTTCACCGATGCCTTCTCGGGCACATCCGCCCACGATGA
TGCGCCCGTCGGCCATGGGCCATTGTCCTTCTGCCACATGGTGGCTCTGA
CGACGATATTGTCCGATATTCTGGATCGATTCTATACTCTCCAGGCGATC
GAAGAATTCAGGACGGCCGGAAACAACCGTACCCGCATGATTTTGGAGCG
CGCCAAGCCGGCTCAGATCCGGCTGAAGGAGTGGTTTGGTCGCCTACCCA
CTCAGCTGAAGATGGACTCGGGCGGGGATATCTTCGAGACCGTCAACGAA
GACAATTCACGTAATGGTGCTTTGCACCTGTCCTATTTTGCCACAGAGAT
CACTCTCCACCGCTGTATTGTGCGGTCCCTCTCCCAAGACACCGCCGACG
CCTACCTCTCCCATATCTGTCGGTCTGCCGCCAAGACTCGTCTAATTTCC
GCCATGGACTTTGTCAACCGTCTTCGTCCGATGCATCTGAGATCATTCTG
GCCGGCCGCCGCGCGGACGAACTTTGCCCTCATCGGATCCTTTGGCGTCC
TGCTTCGCGTCACCGCTCCCACCAAGGAAGAGTCGGAGTTCTACCGTCTT
CGACTGTGCGAATACCGGTGGACGCTGAGTGTGAGCAAGAAGGACGCCGA
ATTCCTCGAATTCGCACTCGAGAGTCTCGACAGCGCGACCAACCTCGATC
ACTACGTCCCGGAGAAACCCGGTATTGACGAGCTCATGACCAGTGCCGCC
AAACCCACCATTAATGCTTCCCGCTCGGGCGCGAACGCCCAGCTGGAGGA
CTCGATGGTCGAGCTGGAACAAACAGGCGAGAGCGGACGCGGGGGCACCT
CCTCCGTTATCTCGGGTTTAGCATCTCCTGCAACCTCGATCAGTGACGAC
AGTGTACAAGACGCTTCCATTCCCCCGCTATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3341012..3343294-

>ATCC64974_53540-T1 ID=ATCC64974_53540-T1|Name=ATCC64974_53540-T1|organism=Aspergillus niger N402|type=CDS|length=4380bp|location=Sequence derived from alignment at OGUI01000007.1:3341012..3343294- (Aspergillus niger N402)
GCAATCTACTACTCTTCCCCCAGCCTCCAACAAACCAGACAGCTCCTCCC
GCCCTGCATTGAACAACCACCACATCCTCACGCCGGCCTTTTGGTTCCAA
TCCACTCAACATATCGGCCTCACCACCGAACTCGAGCCCGCCCTTCTCGA
ATTCTTGCCCCTGGACCAGAACAACGAAGGGTGCGTGGCCTCGTCTCGTG
TGCGCAAGTTCGGTGACGACGGCACCTTCATGCGGGTGGTCAACACCCGT
TCTCACGCGGACTCCCCGCAAACCGCTACGCTCGATGCCATTGAAAGCCT
GGTCGCCCCTTATGGCTCCACCTTGGTGGAGAAGTTCTTCGAGCATGTCC
ATCCAAGCTTTCCCATCCTCATGGAGGATAGCTTCCGCCAGTCCTACCGG
GCACGGACCGGGCTGACGCCGTTGCTATTGTCCGCCGTCTATGTGTTGGC
GTTGAAGTTCGTTGACGTCGGCCCGGCCTCGCAGTCCGTCCGACGCCCGG
ATGCCGGCCGCCTGGAGAGCACTGCCCTCAAGCTGCTGACCGAGTCGCTG
CCCTATGCGTCGATGTCGACGGTGCAAGCCGGCCTGCTGCTCATGCAGCG
GTCCAACCTCGCCACGGCGGCCTTGAACGCACAATTGGTGACCGCCGGGT
TCGAGCTGGGCCTGCACCAAGACTGCTCTAGTTGGCGGATGGAAACGTGG
GAGAAGGGTCTCCGGAAACGCTTGGCATGGGCACTATATATGCAGGACAA
ATGGTCCGCTTTGGTGCATGGTCGTCCGTCCCATATCGTGTCGTCCAATT
GGATGGTCCAGGACCTGGTGGAACAGGATTTCACCGATGCCTTCTCGGGC
ACATCCGCCCACGATGATGCGCCCGTCGGCCATGGGCCATTGTCCTTCTG
CCACATGGTGGCTCTGACGACGATATTGTCCGATATTCTGGATCGATTCT
ATACTCTCCAGGCGATCGAAGAATTCAGGACGGCCGGAAACAACCGTACC
CGCATGATTTTGGAGCGCGCCAAGCCGGCTCAGATCCGGCTGAAGGAGTG
GTTTGGTCGCCTACCCACTCAGCTGAAGATGGACTCGGGCGGGGATATCT
TCGAGACCGTCAACGAAGACAATTCACGTAATGGTGCTTTGCACCTGTCC
TATTTTGCCACAGAGATCACTCTCCACCGCTGTATTGTGCGGTCCCTCTC
CCAAGACACCGCCGACGCCTACCTCTCCCATATCTGTCGGTCTGCCGCCA
AGACTCGTCTAATTTCCGCCATGGACTTTGTCAACCGTCTTCGTCCGATG
CATCTGAGATCATTCTGGCCGGCCGCCGCGCGGACGAACTTTGCCCTCAT
CGGATCCTTTGGCGTCCTGCTTCGCGTCACCGCTCCCACCAAGGAAGAGT
CGGAGTTCTACCGTCTTCGACTGTGCGAATACCGGTGGACGCTGAGTGTG
AGCAAGAAGGACGCCGAATTCCTCGAATTCGCACTCGAGAGTCTCGACAG
CGCGACCAACCTCGATCACTACGTCCCGGAGAAACCCGGTATTGACGAGC
TCATGACCAGTGCCGCCAAACCCACCATTAATGCTTCCCGCTCGGGCGCG
AACGCCCAGCTGGAGGACTCGATGGTCGAGCTGGAACAAACAGGCGAGAG
CGGACGCGGGGGCACCTCCTCCGTTATCTCGGGTTTAGCATCTCCTGCAA
CCTCGATCAGTGACGACAGTGTACAAGACGCTTCCATTCCCCCGCTATAG
ATGGCTGCCGTTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGC
CCCCTCTGCAGCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACC
AACTCCTTCGACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACAC
GCACCTCAACCCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCAT
TGGCACCCTTTCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCG
ACGCCTGTGTGCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAAT
AAATGTTATTCGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTC
CGTGACGAGTCGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAAT
TGGACGACGCCGATGCCGAAGAAGTGGAATCTCCCAAGAGGCAATCTACT
ACTCTTCCCCCAGCCTCCAACAAACCAGACAGCTCCTCCCGCCCTGCATT
GAACAACCACCACATCCTCACGCCGGCCTTTTGGTTCCAATCCACTCAAC
ATATCGGCCTCACCACCGAACTCGAGCCCGCCCTTCTCGAATTCTTGCCC
CTGGACCAGAACAACGAAGGGTGCGTGGCCTCGTCTCGTGTGCGCAAGTT
CGGTGACGACGGCACCTTCATGCGGGTGGTCAACACCCGTTCTCACGCGG
ACTCCCCGCAAACCGCTACGCTCGATGCCATTGAAAGCCTGGTCGCCCCT
TATGGCTCCACCTTGGTGGAGAAGTTCTTCGAGCATGTCCATCCAAGCTT
TCCCATCCTCATGGAGGATAGCTTCCGCCAGTCCTACCGGGCACGGACCG
GGCTGACGCCGTTGCTATTGTCCGCCGTCTATGTGTTGGCGTTGAAGTTC
GTTGACGTCGGCCCGGCCTCGCAGTCCGTCCGACGCCCGGATGCCGGCCG
CCTGGAGAGCACTGCCCTCAAGCTGCTGACCGAGTCGCTGCCCTATGCGT
CGATGTCGACGGTGCAAGCCGGCCTGCTGCTCATGCAGCGGTCCAACCTC
GCCACGGCGGCCTTGAACGCACAATTGGTGACCGCCGGGTTCGAGCTGGG
CCTGCACCAAGACTGCTCTAGTTGGCGGATGGAAACGTGGGAGAAGGGTC
TCCGGAAACGCTTGGCATGGGCACTATATATGCAGGACAAATGGTCCGCT
TTGGTGCATGGTCGTCCGTCCCATATCGTGTCGTCCAATTGGATGGTCCA
GGACCTGGTGGAACAGGATTTCACCGATGCCTTCTCGGGCACATCCGCCC
ACGATGATGCGCCCGTCGGCCATGGGCCATTGTCCTTCTGCCACATGGTG
GCTCTGACGACGATATTGTCCGATATTCTGGATCGATTCTATACTCTCCA
GGCGATCGAAGAATTCAGGACGGCCGGAAACAACCGTACCCGCATGATTT
TGGAGCGCGCCAAGCCGGCTCAGATCCGGCTGAAGGAGTGGTTTGGTCGC
CTACCCACTCAGCTGAAGATGGACTCGGGCGGGGATATCTTCGAGACCGT
CAACGAAGACAATTCACGTAATGGTGCTTTGCACCTGTCCTATTTTGCCA
CAGAGATCACTCTCCACCGCTGTATTGTGCGGTCCCTCTCCCAAGACACC
GCCGACGCCTACCTCTCCCATATCTGTCGGTCTGCCGCCAAGACTCGTCT
AATTTCCGCCATGGACTTTGTCAACCGTCTTCGTCCGATGCATCTGAGAT
CATTCTGGCCGGCCGCCGCGCGGACGAACTTTGCCCTCATCGGATCCTTT
GGCGTCCTGCTTCGCGTCACCGCTCCCACCAAGGAAGAGTCGGAGTTCTA
CCGTCTTCGACTGTGCGAATACCGGTGGACGCTGAGTGTGAGCAAGAAGG
ACGCCGAATTCCTCGAATTCGCACTCGAGAGTCTCGACAGCGCGACCAAC
CTCGATCACTACGTCCCGGAGAAACCCGGTATTGACGAGCTCATGACCAG
TGCCGCCAAACCCACCATTAATGCTTCCCGCTCGGGCGCGAACGCCCAGC
TGGAGGACTCGATGGTCGAGCTGGAACAAACAGGCGAGAGCGGACGCGGG
GGCACCTCCTCCGTTATCTCGGGTTTAGCATCTCCTGCAACCTCGATCAG
TGACGACAGTGTACAAGACGCTTCCATTCCCCCGCTATAGATGGCTGCCG
TTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGCCCCCTCTGCA
GCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACCAACTCCTTCG
ACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACACGCACCTCAAC
CCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCATTGGCACCCTT
TCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCGACGCCTGTGT
GCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAATAAATGTTATT
CGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTCCGTGACGAGT
CGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAATTGGACGACGC
CGATGCCGAAGAAGTGGAATCTCCCAAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_53540ATCC64974_53540Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53540-T1ATCC64974_53540-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53540-T1.cdsATCC64974_53540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53540-T1.exon2ATCC64974_53540-T1.exon2Aspergillus niger N402exon
ATCC64974_53540-T1.exon1ATCC64974_53540-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3341012..3343294 -
Powered by Drupal