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ATCC64974_53550-T1, ATCC64974_53550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_53550-T1
Unique NameATCC64974_53550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3346727..3347414-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_53550-T1 ID=ATCC64974_53550-T1|Name=ATCC64974_53550-T1|organism=Aspergillus niger N402|type=mRNA|length=688bp|location=Sequence derived from alignment at OGUI01000007.1:3346727..3347414- (Aspergillus niger N402)
ATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCA
AGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACA
CGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTG
GAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGTGAGTACA
CCTATCTATCTATCTTTTTATCATTCCTGGATTGGGCTATGGTGGAGGGG
GTGGTAGTGTTGGGTTGGTTACAGGAGTGGAAGAGTAGAAGCTAATATAT
TATAATTGTTGGTGTTTAGGAATCTTACGAAGACACTTGATTACTTAGAG
GTGTTTGCCCGGTTCAAGGACGAAGAGAATATCAAGGCTGTGGAGCGGTT
GTTGAATTCGCATACCGAGTTGGAGATGTTTGAGCGGTCGCAGCTTGGTA
TGTATATTTATTTATTCCTATGGGGATTTTCTTTGCTGGGGAAGAGTATT
GTGAATGTGTCACAAGGGGACTCATGGATGAAGTGGTCAGCAGCAGCTAA
CAAGTAACAGGAAGTCTGTGCTGCGATAACGCCGAGGAAGCCAAATCGCT
CATTCCGAGTCTGCAGCATAAGATCTCGGATGGGGATTTGCAGGAGCTGC
TGGATGAGTTGACCAAGTTGCGCAATTTCACTGAGTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:3346727..3347414-

>ATCC64974_53550-T1 ID=ATCC64974_53550-T1|Name=ATCC64974_53550-T1|organism=Aspergillus niger N402|type=CDS|length=1341bp|location=Sequence derived from alignment at OGUI01000007.1:3346727..3347414- (Aspergillus niger N402)
GAAGTCTGTGCTGCGATAACGCCGAGGAAGCCAAATCGCTCATTCCGAGT
CTGCAGCATAAGATCTCGGATGGGGATTTGCAGGAGCTGCTGGATGAGTT
GACCAAGTTGCGCAATTTCACTGAGTAGGAATCTTACGAAGACACTTGAT
TACTTAGAGGTGTTTGCCCGGTTCAAGGACGAAGAGAATATCAAGGCTGT
GGAGCGGTTGTTGAATTCGCATACCGAGTTGGAGATGTTTGAGCGGTCGC
AGCTTGATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCT
CCCGCAAGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACC
AGAACACGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAG
GTGTTGGAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGAA
GTCTGTGCTGCGATAACGCCGAGGAAGCCAAATCGCTCATTCCGAGTCTG
CAGCATAAGATCTCGGATGGGGATTTGCAGGAGCTGCTGGATGAGTTGAC
CAAGTTGCGCAATTTCACTGAGTAGGAATCTTACGAAGACACTTGATTAC
TTAGAGGTGTTTGCCCGGTTCAAGGACGAAGAGAATATCAAGGCTGTGGA
GCGGTTGTTGAATTCGCATACCGAGTTGGAGATGTTTGAGCGGTCGCAGC
TTGATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCC
GCAAGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGA
ACACGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTG
TTGGAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGAAGTC
TGTGCTGCGATAACGCCGAGGAAGCCAAATCGCTCATTCCGAGTCTGCAG
CATAAGATCTCGGATGGGGATTTGCAGGAGCTGCTGGATGAGTTGACCAA
GTTGCGCAATTTCACTGAGTAGGAATCTTACGAAGACACTTGATTACTTA
GAGGTGTTTGCCCGGTTCAAGGACGAAGAGAATATCAAGGCTGTGGAGCG
GTTGTTGAATTCGCATACCGAGTTGGAGATGTTTGAGCGGTCGCAGCTTG
ATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCA
AGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACA
CGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTG
GAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030880RNA polymerase complex
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_53550ATCC64974_53550Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53550-T1ATCC64974_53550-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53550-T1.cdsATCC64974_53550-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53550-T1.exon3ATCC64974_53550-T1.exon3Aspergillus niger N402exon
ATCC64974_53550-T1.exon2ATCC64974_53550-T1.exon2Aspergillus niger N402exon
ATCC64974_53550-T1.exon1ATCC64974_53550-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264ZI5
DBxrefInterPro:IPR010997
DBxrefInterPro:IPR038324
DBxrefInterPro:IPR005574
DBxrefInterPro:IPR006590
DBxrefPFAM:PF03874
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3346727..3347414 -
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