You are here

Home

ATCC64974_53860-T1, ATCC64974_53860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_53860-T1
Unique NameATCC64974_53860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3445564..3446894-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_53860-T1 ID=ATCC64974_53860-T1|Name=ATCC64974_53860-T1|organism=Aspergillus niger N402|type=mRNA|length=1331bp|location=Sequence derived from alignment at OGUI01000007.1:3445564..3446894- (Aspergillus niger N402)
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGTTATCACTCACCCATTAACCTACTATTG
ATAGCTGACGGGAGGCATGCTACGGTCATAGGAAGATCCAACACAATCGA
ATCTATCGATTGAATCTCAGGAATGAGAGTGAATCCCGGAAGGTCTGTTT
CAAGTTCCTCGATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGC
TCCACCCCGAACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGT
GGTCTCGACACCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGC
TGCCTTGCTTCGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACAT
ACGATGGCAACCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTC
CACCACGTTATCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTAT
TATCAAGGACATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTC
ACAAGGTTACCCTGAGCAATCCTGATAAAGCCGGTGTCATGACTATAGCC
GAGTATGATCTGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCT
TACCCGCTTCTTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACT
ACCCGAAGTTATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATC
ATCCGCGACGTCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAA
ACAGATATGGTCTAAGTACGTCAGCGACTTCGCAGATCTATTTAAGCCAG
AAAATTGTGAGGCGGCCTTAGACTGCAGTTCTGAGATGATTCTTAACGCA
CTAGAACATGCCAAGGACTGTCTTGTCTATCTGGCTAAGTTGAATGAGCA
GAGCATCTTTAATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGC
TAGAGCTGTGCTTCCGCAATCCCGCTCTGTTTGAGCAGGACGTCAATGTT
AAAATCAGCAGGGGTGATGCATGTCAGCTGATGATTGAGTGCACACAGGG
CCTGCCGGGGCTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAA
CCAAGAATTCACAAAGTGCCACCAATCTTTCCGAAATCAATACGGTGTGC
GATTCGGTATGTTATCTCATTTGTACTTCATAGTGGGCGAGTCCTAACAA
CCATAGATCGAGAAAGCAGTCGAAGAATTATTTCATACGGAAGAAGGACA
AACTCATCAGTGCAATGAGGATGAACAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3445564..3446894-

>ATCC64974_53860-T1 ID=ATCC64974_53860-T1|Name=ATCC64974_53860-T1|organism=Aspergillus niger N402|type=CDS|length=3654bp|location=Sequence derived from alignment at OGUI01000007.1:3445564..3446894- (Aspergillus niger N402)
ATCGAGAAAGCAGTCGAAGAATTATTTCATACGGAAGAAGGACAAACTCA
TCAGTGCAATGAGGATGAACAGTAAGAAGATCCAACACAATCGAATCTAT
CGATTGAATCTCAGGAATGAGAGTGAATCCCGGAAGGTCTGTTTCAAGTT
CCTCGATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGCTCCACC
CCGAACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGTGGTCTC
GACACCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGCTGCCTT
GCTTCGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACATACGATG
GCAACCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTCCACCAC
GTTATCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTATTATCAA
GGACATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTCACAAGG
TTACCCTGAGCAATCCTGATAAAGCCGGTGTCATGACTATAGCCGAGTAT
GATCTGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCTTACCCG
CTTCTTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACTACCCGA
AGTTATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATCATCCGC
GACGTCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAAACAGAT
ATGGTCTAAGTACGTCAGCGACTTCGCAGATCTATTTAAGCCAGAAAATT
GTGAGGCGGCCTTAGACTGCAGTTCTGAGATGATTCTTAACGCACTAGAA
CATGCCAAGGACTGTCTTGTCTATCTGGCTAAGTTGAATGAGCAGAGCAT
CTTTAATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGCTAGAGC
TGTGCTTCCGCAATCCCGCTCTGTTTGAGCAGGACGTCAATGTTAAAATC
AGCAGGGGTGATGCATGTCAGCTGATGATTGAGTGCACACAGGGCCTGCC
GGGGCTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAACCAAGA
ATTCACAAAGTGCCACCAATCTTTCCGAAATCAATACGGTGTGCGATTCG
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGATCGAGAAAGCAGTCGAAGAATTATTTCATAC
GGAAGAAGGACAAACTCATCAGTGCAATGAGGATGAACAGTAAGAAGATC
CAACACAATCGAATCTATCGATTGAATCTCAGGAATGAGAGTGAATCCCG
GAAGGTCTGTTTCAAGTTCCTCGATCAGACCGGCCGGAGCTTCAGTGCCG
TTATCAAGGAGCTCCACCCCGAACTGCTCGTCCCTATTTGTATCTTCTAC
CTGGTCCTCCGTGGTCTCGACACCATAGAAGACGACCCTTCTATTTCTGT
GAAGGCTAAGGCTGCCTTGCTTCGCGGCTTCGAGGATGTATTGGTGAAGG
ACGGGTGGACATACGATGGCAACCGTCCCGAAGAGAAGGACCGCGAACTG
CTTGTTCACTTCCACCACGTTATCAACGAGTACAAAGCTTTGAAGCCAGC
CTGCAGACTTATTATCAAGGACATCACCAGGGTAATGGGTAATGGAATGG
CCGACTTCTGTCACAAGGTTACCCTGAGCAATCCTGATAAAGCCGGTGTC
ATGACTATAGCCGAGTATGATCTGTACTGCTATTATGTTGCCGGCTGTGT
CGGCGAGGGCCTTACCCGCTTCTTCATCGAAGCGCAACTTTGCAACTCGT
CGTTGCTCGACTACCCGAAGTTATCCCGGTCAATGGGTGCCTTCCTCCAG
AAGACCAACATCATCCGCGACGTCAGTGAAGATCACGGAGACCACCGTTG
CTTTTGGCCCAAACAGATATGGTCTAAGTACGTCAGCGACTTCGCAGATC
TATTTAAGCCAGAAAATTGTGAGGCGGCCTTAGACTGCAGTTCTGAGATG
ATTCTTAACGCACTAGAACATGCCAAGGACTGTCTTGTCTATCTGGCTAA
GTTGAATGAGCAGAGCATCTTTAATTTCTGCGCTGTACCCCAGAGCATGG
CTATCGCGACGCTAGAGCTGTGCTTCCGCAATCCCGCTCTGTTTGAGCAG
GACGTCAATGTTAAAATCAGCAGGGGTGATGCATGTCAGCTGATGATTGA
GTGCACACAGGGCCTGCCGGGGCTGTGTCGTATTGTCAGTCGATATGCAC
GACGCATCAAAACCAAGAATTCACAAAGTGCCACCAATCTTTCCGAAATC
AATACGGTGTGCGATTCGATGGAGTATATCAGCAGCGCTCTCTACTACGT
CTTTCATCCATATCAATTGAGAGATATTCTGAAATGATCGAGAAAGCAGT
CGAAGAATTATTTCATACGGAAGAAGGACAAACTCATCAGTGCAATGAGG
ATGAACAGTAAGAAGATCCAACACAATCGAATCTATCGATTGAATCTCAG
GAATGAGAGTGAATCCCGGAAGGTCTGTTTCAAGTTCCTCGATCAGACCG
GCCGGAGCTTCAGTGCCGTTATCAAGGAGCTCCACCCCGAACTGCTCGTC
CCTATTTGTATCTTCTACCTGGTCCTCCGTGGTCTCGACACCATAGAAGA
CGACCCTTCTATTTCTGTGAAGGCTAAGGCTGCCTTGCTTCGCGGCTTCG
AGGATGTATTGGTGAAGGACGGGTGGACATACGATGGCAACCGTCCCGAA
GAGAAGGACCGCGAACTGCTTGTTCACTTCCACCACGTTATCAACGAGTA
CAAAGCTTTGAAGCCAGCCTGCAGACTTATTATCAAGGACATCACCAGGG
TAATGGGTAATGGAATGGCCGACTTCTGTCACAAGGTTACCCTGAGCAAT
CCTGATAAAGCCGGTGTCATGACTATAGCCGAGTATGATCTGTACTGCTA
TTATGTTGCCGGCTGTGTCGGCGAGGGCCTTACCCGCTTCTTCATCGAAG
CGCAACTTTGCAACTCGTCGTTGCTCGACTACCCGAAGTTATCCCGGTCA
ATGGGTGCCTTCCTCCAGAAGACCAACATCATCCGCGACGTCAGTGAAGA
TCACGGAGACCACCGTTGCTTTTGGCCCAAACAGATATGGTCTAAGTACG
TCAGCGACTTCGCAGATCTATTTAAGCCAGAAAATTGTGAGGCGGCCTTA
GACTGCAGTTCTGAGATGATTCTTAACGCACTAGAACATGCCAAGGACTG
TCTTGTCTATCTGGCTAAGTTGAATGAGCAGAGCATCTTTAATTTCTGCG
CTGTACCCCAGAGCATGGCTATCGCGACGCTAGAGCTGTGCTTCCGCAAT
CCCGCTCTGTTTGAGCAGGACGTCAATGTTAAAATCAGCAGGGGTGATGC
ATGTCAGCTGATGATTGAGTGCACACAGGGCCTGCCGGGGCTGTGTCGTA
TTGTCAGTCGATATGCACGACGCATCAAAACCAAGAATTCACAAAGTGCC
ACCAATCTTTCCGAAATCAATACGGTGTGCGATTCGATGGAGTATATCAG
CAGCGCTCTCTACTACGTCTTTCATCCATATCAATTGAGAGATATTCTGA
AATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004310farnesyl-diphosphate farnesyltransferase activity
GO:0051996squalene synthase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006696ergosterol biosynthetic process
GO:0009058biosynthetic process
GO:0008610lipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_53860ATCC64974_53860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53860-T1ATCC64974_53860-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53860-T1.cdsATCC64974_53860-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53860-T1.exon3ATCC64974_53860-T1.exon3Aspergillus niger N402exon
ATCC64974_53860-T1.exon2ATCC64974_53860-T1.exon2Aspergillus niger N402exon
ATCC64974_53860-T1.exon1ATCC64974_53860-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.5
DBxrefInterPro:IPR033904
DBxrefInterPro:IPR019845
DBxrefInterPro:IPR002060
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR006449
DBxrefPFAM:PF00494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3445564..3446894 -
Powered by Drupal