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ATCC64974_54210-T1, ATCC64974_54210-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54210-T1
Unique NameATCC64974_54210-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3560355..3561514-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54210-T1 ID=ATCC64974_54210-T1|Name=ATCC64974_54210-T1|organism=Aspergillus niger N402|type=mRNA|length=1160bp|location=Sequence derived from alignment at OGUI01000007.1:3560355..3561514- (Aspergillus niger N402)
ATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACGCCTACTC
AGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCCAATGTCA
TTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGGTGGTGGT
GTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTGATCTCGG
GTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCCTCCAACC
TTTGGGTAAGACAGACTGACAACCCTGGACATCACCCTTGCCATCTGCAG
TTCTGACATTCCCGCAGGCTCCGGACGTACACTACGTAGATGGCACATAC
TACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCCACCATTGG
AGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGACCACGGCG
AGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCATTGACCCC
AACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGGCTCCTACTG
GCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGCCAGCAGCA
GCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCATGCTATCGAG
GCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCACCTTCTCGTC
CGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGGCGATGAGT
ACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACTTTGTAAGT
GCTATATGCCAATCATCAACATTCAAGGAATAGGGGGGGAATGCTAATTT
CGCCTGCAGGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAAC
CACCGTTCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGTAAG
TTTGCCCCTGTCTTCTTTTGTGGCTTGACGCACATCAAACGGGGAAGCAT
GCTAACAATGATCAATTGCAGGGGTATCATCAACACCACCAGCCACGGTA
TTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGAT
GACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGT
TGTGGCGTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3560355..3561514-

>ATCC64974_54210-T1 ID=ATCC64974_54210-T1|Name=ATCC64974_54210-T1|organism=Aspergillus niger N402|type=CDS|length=3828bp|location=Sequence derived from alignment at OGUI01000007.1:3560355..3561514- (Aspergillus niger N402)
GGGTATCATCAACACCACCAGCCACGGTATTGTCGTCTACTACCACTATG
CCAACAAGAACATTGGCCTGGCTGTCGATGACTACCAGTTCGGCTGGAAC
ACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCGTGAGTCGACAAGGA
TGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCCAGCCACG
ACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGTACACTACGTAGATG
GCACATACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCC
ACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGA
CCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCA
TTGACCCCAACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGGC
TCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGC
CAGCAGCAGCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCATG
CTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCACC
TTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGG
CGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACT
TTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACGCCTAC
TCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCCAATGT
CATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGGTGGTG
GTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTGATCTC
GGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCCTCCAA
CCTTTGGGGGTATCATCAACACCACCAGCCACGGTATTGTCGTCTACTAC
CACTATGCCAACAAGAACATTGGCCTGGCTGTCGATGACTACCAGTTCGG
CTGGAACACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCGTGAGTCG
ACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCC
AGCCACGACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGTACACTAC
GTAGATGGCACATACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCG
GGATTCCACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCT
GGACCGACCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTAC
AACGCCATTGACCCCAACTGGATCACCATTGGCAGCACCCCCTATCTCCA
ATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCC
TGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCTACAACGCATCGGGG
AACCATGCTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTA
CCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTG
CCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACG
GGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAA
CGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACC
CCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACA
GGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGAC
TGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATG
CCTCCAACCTTTGGGGGTATCATCAACACCACCAGCCACGGTATTGTCGT
CTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGATGACTACC
AGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGTTGTGGCG
TGAGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGT
TCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGCTCCGGACGT
ACACTACGTAGATGGCACATACTACATGTACTATGCTAGCTCTACCCTGG
GCAGCCGGGATTCCACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCC
GACTCCTGGACCGACCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCAC
CCCTTACAACGCCATTGACCCCAACTGGATCACCATTGGCAGCACCCCCT
ATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACC
GACTCCCTGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCTACAACGC
ATCGGGGAACCATGCTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCT
ACTACTACCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCC
CTGCCTGCCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGAC
TGGAACGGGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGT
TGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCA
CACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTT
CTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTC
CCTGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTG
GGAAATGCCTCCAACCTTTGGGGGTATCATCAACACCACCAGCCACGGTA
TTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGAT
GACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGT
TGTGGCGTGAGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAA
CCACCGTTCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGCTC
CGGACGTACACTACGTAGATGGCACATACTACATGTACTATGCTAGCTCT
ACCCTGGGCAGCCGGGATTCCACCATTGGAGTTGCAACCTCCACCACCCT
GGAAGCCGACTCCTGGACCGACCACGGCGAGATTGGTGTCACCTCGTCTT
CGTCCACCCCTTACAACGCCATTGACCCCAACTGGATCACCATTGGCAGC
ACCCCCTATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTACCAGGTGGA
AATGACCGACTCCCTGAGCGCCAGCAGCAGCACGCCCACTAACTTGGCCT
ACAACGCATCGGGGAACCATGCTATCGAGGCTTCTTACCTGTACGAGTAC
GGAGGCTACTACTACCTCACCTTCTCGTCCGGCAAGGCTCAGGGGTACAC
GACCTCCCTGCCTGCCCAGGGCGATGAGTACCGCATTGTCGTTTGCCGGT
CCAAGACTGGAACGGGTAACTTTATGCTTTCGTTTGTCTTGCTTCTTTGT
GTAGCGTTGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTG
CTGGGCACACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACT
TTCGTTTCTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATC
ACTGGTCCCTGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGT
TACAGTGGGAAATGCCTCCAACCTTTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54210ATCC64974_54210Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54210-T1ATCC64974_54210-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54210-T1.cdsATCC64974_54210-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54210-T1.exon4ATCC64974_54210-T1.exon4Aspergillus niger N402exon
ATCC64974_54210-T1.exon3ATCC64974_54210-T1.exon3Aspergillus niger N402exon
ATCC64974_54210-T1.exon2ATCC64974_54210-T1.exon2Aspergillus niger N402exon
ATCC64974_54210-T1.exon1ATCC64974_54210-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-15)
NoteCAZy:GH43_7
NoteCAZy:GH43_30
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3560355..3561514 -
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