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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:3591945..3593315- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_54300-T1 ID=ATCC64974_54300-T1|Name=ATCC64974_54300-T1|organism=Aspergillus niger N402|type=mRNA|length=1371bp|location=Sequence derived from alignment at OGUI01000007.1:3591945..3593315- (Aspergillus niger N402)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGT
TATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTG
GAGGCACAAATATTGGAGAGGATATCAGGAAGCTTGACTACGGCCAGCAT
GTCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCA
TCTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAAC
TACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTT
CCTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGT
GCTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCA
AGCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTG
GAGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTT
GACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACT
GGCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCAC
GGTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCA
GGGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCG
ATGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGT
GAAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGG
TGTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACA
TTGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATG
TTGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCA
GTTGCCGATCTTCTGTCATAA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:3591945..3593315- >ATCC64974_54300-T1 ID=ATCC64974_54300-T1|Name=ATCC64974_54300-T1|organism=Aspergillus niger N402|type=CDS|length=4800bp|location=Sequence derived from alignment at OGUI01000007.1:3591945..3593315- (Aspergillus niger N402)
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_54300-T1 | ATCC64974_54300-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:3591945..3593315 - |
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