You are here

Home

ATCC64974_54310-T1, ATCC64974_54310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54310-T1
Unique NameATCC64974_54310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3593592..3595224+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54310-T1 ID=ATCC64974_54310-T1|Name=ATCC64974_54310-T1|organism=Aspergillus niger N402|type=mRNA|length=1633bp|location=Sequence derived from alignment at OGUI01000007.1:3593592..3595224+ (Aspergillus niger N402)
ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGA
GCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATGTAAGTAACT
CTGCAGTCTCTATCTCGTCGCTCTCTGCTAACTCACTCCTTTACTTTCAG
ATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCG
TATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACG
GCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAG
GAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCC
TAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCG
GAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAA
GAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCT
CAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATACCTCGACATAT
TCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTT
TCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAG
CTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTA
GCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGT
TGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGG
CTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATG
AGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCT
GAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGC
GACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCG
CAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAG
CGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACG
GGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTG
GCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATC
TACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTA
CTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCT
GCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCA
GAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATAC
CAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGG
AGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTG
GTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCT
TGAGTACGTGCCCCCAACAGTTCCGCGGCCTAATGGAACCTTTACTAATG
TTTACCAGTCTGCAAAAGCAAGGTATACTGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3593592..3595224+

>ATCC64974_54310-T1 ID=ATCC64974_54310-T1|Name=ATCC64974_54310-T1|organism=Aspergillus niger N402|type=CDS|length=4554bp|location=Sequence derived from alignment at OGUI01000007.1:3593592..3595224+ (Aspergillus niger N402)
ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGA
GCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATATTCGGGATC
GCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAAGAC
CAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCGTGA
GAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAGGAGTTCTACA
AGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCA
GTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGA
AGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAAGAGGGTTATG
GACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTGCCT
GGGGTCAAACGGCTCTCATATGTACAATACCTCGACATATTCGATGCGTT
TACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTTTCCGATCGGT
ATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAG
AAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGA
GGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGTTGGACGGAGG
AGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAA
GGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTA
TAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCTGAAGCTCGCA
AAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGC
GCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGA
ACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGA
CGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAG
ATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCG
TGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATCTACAATCCCC
TCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTAC
AAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTT
TGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTAC
ATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTTTTC
CGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGA
GCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTGGTACAGATGG
AGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGATCTGCAA
AAGCAAGGTATACTGTAAATGATTTTCGAGGAGCAACGGTTTATCCACGA
GGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGC
CTCGTAATATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTC
TTAAAGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGA
TGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATC
AATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAG
CGCTACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCGTCG
TCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCA
CCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAA
GACTACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATACCT
CGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACA
ACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTAC
TTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACT
TTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGG
TACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAG
ACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTT
CAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTC
GGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCA
GCCCCTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACG
TGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGC
AGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATG
ACTGAACGGGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGA
GAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAG
ACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCA
ATTCCCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTG
CGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGC
ATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACT
TCTAATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAG
GCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCG
ACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGG
ATCTACCTTGATCTGCAAAAGCAAGGTATACTGTAAATGATTTTCGAGGA
GCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCG
ACCGCGTTGCCGAAGAGCCTCGTAATATTCGGGATCGCTTGGCTCGCGAT
CATGAAGTCGCACATTTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTT
GCTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAA
CCATCTCAACCGGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAG
ATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGA
ACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGG
AGATCGACAATCTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGAC
CTCACAACACTGCACGAAGACTACCTCAATTTGCCTGGGGTCAAACGGCT
CTCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAAC
TTCCGATTAAGCGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTC
GGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTT
ACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGC
AATGGACGGCGAATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAAT
GGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGC
TGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGA
CAGGCAAAAAGCACATTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGAT
ACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGCGCATCATCCGTGGC
TCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTT
CTCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTG
GAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAGATGGAACTTGAAGC
TCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAAT
CTGACGAGGACGACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTT
GCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTACAAGCTGCATGGCCT
GGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCC
GTCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTG
AAGTGTCTTGGTATCACTTCTAATACCAACCTTTTCCGTGAAATCACTCG
GATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGA
AGGATAGAGATAATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGC
AATGTGATGCCGGAGAGGATCTACCTTGATCTGCAAAAGCAAGGTATACT
GTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54310ATCC64974_54310Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54310-T1.exon1ATCC64974_54310-T1.exon1Aspergillus niger N402exon
ATCC64974_54310-T1.exon2ATCC64974_54310-T1.exon2Aspergillus niger N402exon
ATCC64974_54310-T1.exon3ATCC64974_54310-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54310-T1.cdsATCC64974_54310-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54310-T1ATCC64974_54310-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR024598
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR021966
DBxrefInterPro:IPR031774
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF12108
DBxrefPFAM:PF16837
DBxrefPFAM:PF11931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3593592..3595224 +
Powered by Drupal