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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:3595744..3598987+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_54320-T1 ID=ATCC64974_54320-T1|Name=ATCC64974_54320-T1|organism=Aspergillus niger N402|type=mRNA|length=3244bp|location=Sequence derived from alignment at OGUI01000007.1:3595744..3598987+ (Aspergillus niger N402)
ATGGGGTTCAAATTTGCTCGCTTGTGCGACTTACTATCAGCCCTCGAAGA
TAACAGGATCCTGAAAGCTGCCCATGAGGCCAAAGTTGTGAATCCTGACA
TTCGGGCCGTATCACGATGGTTCGCCCAAAATGACAAGCAAATTCACGAC
AAAGATACCGACCAGTTGGCCCTCCTTTCCTGCATGTTTCCTGAGAAACG
AACAGATCGTGTCTACTGGCTACAGGATACATCCCTGGCCAAGATTATAG
CACGGTGTCTGCTCCTGGGCTGTTCACGGCGGCAGGAGCTGGAGCGTTGG
CGTGTCTCCGGGGGCGTAGACCTGGGACAATGCGTGGAGAATGTCATGCG
GCAGGCTGAAAACCATGTCACCAACGGCCAAGATGTCACTGTGGAGGAGA
TAGACAAAGCTCTAGCTGAAATCGCCTCTCGTTGCAAGTTTTCTGGTCCT
CGGGTGCGAAGGCAGCGTACGGCAGTCAAGGTCGATCAGACGCTGTCCTC
ATTATATCGACGACTAAGTAGCAGAGATGCGAAATGGCTTACACGGATGA
TACTAAAAAGTTATTCTCCTGTTTCTCTACCGACAAACATGATCTTGAAA
CGCTTCCATTTCCTTCTTCCACATCTGCTTCTCTTTCAGGACTCTTTCGA
ACGCGCTTTAAGCGTGCTGGGTACTAGCCCAATAAGACACTTCCCGCCTC
AACCAGAGCCTGCATTAGCCAAAGACCTGGGGTTCATCGCGTTAGGGCAT
CTCAGTCCTGCTGTGGGAGTCAAGATAGGACGACCCGAGTACTATAAGGC
TAGGAGCATCAAGCATTGCTGTCGCATGGTCGGCAACCGTCGTATGAGTA
TCGAAAGGAAGTATGATGGTGAATATTGCCAGATACATATCGATCTCTCC
AAGGACTCCAACTGGATTCAAATATTTTCTAAAAGCGGTAAAGATTCAAC
AGCAGACCGCGCCGGTATCCATCAAGTCATCAACGAGTCTTTGAACCTAA
GACGGCCGGGTTGCAAGGTTTCCCGGCGATGCATTCTGGAGGGCGAACTG
CTTGTTTGGAGTGATAAGCATGGCAAGATCGCAGATTTTCATAAGTTGCG
TAAGTTCATATCGCGTTCAGGCACTTTCATTGGAACTGAAAGCGACTCCC
CGTAAGTGGCACGGCATGTAGTTTCCAGCGCTGTCTTCTGACTCTGCAAA
TAGCCCACAACCTTATGAGCATCTGATGATAGTATTTTTTGACATCCTGC
TCATCGATGACAATGTTTGTCTGAGGCTCCCACACCGGGAGCGGAGATTG
CTTCTGAAAGACATTATAGAGCCAATCCCAGGACGTGCGGATATATCTGA
GCAGTGGGTTGTTGACTTTTCCCATCATGGCGGTCAATCTCGACTAGAAA
GTGTCTTCCACAAAGGCATCGATGAGCGATGGGAAGGATTTGTCCTAAAA
GCATGTGAAGATCCTTACTTTACAATATTTTCTGATGACAAGGACAATCC
CTCCTTCGGTCGCTGGATCAAGCTAAAGAAGGATTATATACCCGGACTGG
GTGATACCGTCGACCTCGCAATCATCGGCGCGAGGTATAACTCTCGGGAT
GCTATGGCAATCAAGCAAGTCAAAAAGCTATTATGGACTGAATTCTTCAT
TGGATGCCTCGTCAATGAAGAGATGGTTGTTCAATGTGGAGCCATACCAA
AATTTCGGGTGCTGGATGTTATCAACCACAAATGCATGCATGTCAGATTC
ATGCAGTTCTTAAACCAATACGGCGAATTCTGCGCGCGCAGTCCAGACTC
CGAACACGGATTCAATCTTGAATACGGAGAGAGTGTAGTCAACCCTATGG
ACGTCGTCTTCAAAACACCCTTTGTCGTTGAGATGTTAGGCAGTGGCTTC
GAAAAGCCGTCTGGCGCCAGATACTATACACTGCGTTTCCCTAGGATCTT
GAAGGTCCTTTCTGACCGATCATTTGAGGACGCTGCGTCATATAGAGAGT
TGCAGTTATTAGCAGAAACCGCTCGAACCGTCCTTGATGAGGATCCAGGG
ACTCACGAGTATGAAGCCGCCAAACGGATGAAGCTGCGAGATTGCACGGA
GTGTACACCGGAGGGATCACAAAGTTTTCAGACAACACAGAGCCCTTGTC
TCCAGTCTTCAACTACTGCAAAAGATGACTCAGGTAACGGAGCATTCGTG
TCTCTCCCGAACAAAGCATCAAACGCCCCAGACGCGTTACCTGGCTCAAC
GAGGCAAACCAAACGACGTCGCGAGAGCAGCGCTATGCAACGTACCATTC
CCATCCATGTGGATCTCAATAGAGACCCCTCCCCGCCTGTAGGGCACAGT
GTATGCGGCAATTACCTGACAGACAATGAAAATCTGTCTTCGCATGCAGC
CGGACAGAGGAAGAACTCAACCCAACCAACCGATTCTTCTGATGCAGAGA
AAGCCTCCCGCACCTGTCGAATGCCTAGTCCATTAACTAGCCTAGACAAG
CTTCAAAAGCACTCATTACCTGTTTATACACCGCTCCACTGCCATATTGG
ATCAAACGCAAGCCGGGAAATTTGCAATCGCCATCAACTTGGTGATGAAG
TCGTGACTGCCCACCTCGGCCAGAAACCAATCCGGCGCATTCTATCACCA
TTGCTCCACAGACTTATATACGTTCATCATGGCATATCATCCGATCACAT
GGCAGTGTCTCAATCCATACCAAATGCATGGAATATAGCACCCACCCTCA
AAGAGTTTGTCCGCTCATTAACACGCCTAGAGTCACGAACCCACCCCAGG
ACATCCAACCCTCACGCAGTCTCGCACTACACAGCTTGCGGACTGGCCAT
GATACCTGGCAAGGAAGATGCGCTATGTACGGTTCTTCCCGATCTAATAA
AAAGCATAGGAAATGCTTTCCAGTCTCACAAATCCAACAGCCACCACCAT
GGCGGAAAAGTCTTTATTCTCGATTCGAGCTTTCTCAAACTCAAGATCAG
TAATTATGACACGGCAATTTGCCCCGGCCAGACATGGGAAGACATTAGCA
AGGTGTTTTTCTATGCCTGCGTGAGCTGGACGTTCAACGGGACTACAGGT
TGTGACACGTTTGAGAAGTACCAAGTCGGAGAATGTGACGCGCTCTACAC
GAGGCCTAAGATCACGGTTAGCTTCGATAGACGTGAGTTGGGTCGGTTGG
AGGAAATATTCCGCACTGAGACACCGAACACTTATACTATTTGA back to topCoding sequence (CDS) from alignment at OGUI01000007.1:3595744..3598987+ >ATCC64974_54320-T1 ID=ATCC64974_54320-T1|Name=ATCC64974_54320-T1|organism=Aspergillus niger N402|type=CDS|length=6384bp|location=Sequence derived from alignment at OGUI01000007.1:3595744..3598987+ (Aspergillus niger N402)
ATGGGGTTCAAATTTGCTCGCTTGTGCGACTTACTATCAGCCCTCGAAGA
TAACAGGATCCTGAAAGCTGCCCATGAGGCCAAAGTTGTGAATCCTGACA
TTCGGGCCGTATCACGATGGTTCGCCCAAAATGACAAGCAAATTCACGAC
AAAGATACCGACCAGTTGGCCCTCCTTTCCTGCATGTTTCCTGAGAAACG
AACAGATCGTGTCTACTGGCTACAGGATACATCCCTGGCCAAGATTATAG
CACGGTGTCTGCTCCTGGGCTGTTCACGGCGGCAGGAGCTGGAGCGTTGG
CGTGTCTCCGGGGGCGTAGACCTGGGACAATGCGTGGAGAATGTCATGCG
GCAGGCTGAAAACCATGTCACCAACGGCCAAGATGTCACTGTGGAGGAGA
TAGACAAAGCTCTAGCTGAAATCGCCTCTCGTTGCAAGTTTTCTGGTCCT
CGGGTGCGAAGGCAGCGTACGGCAGTCAAGGTCGATCAGACGCTGTCCTC
ATTATATCGACGACTAAGTAGCAGAGATGCGAAATGGCTTACACGGATGA
TACTAAAAAGTTATTCTCCTGTTTCTCTACCGACAAACATGATCTTGAAA
CGCTTCCATTTCCTTCTTCCACATCTGCTTCTCTTTCAGGACTCTTTCGA
ACGCGCTTTAAGCGTGCTGGGTACTAGCCCAATAAGACACTTCCCGCCTC
AACCAGAGCCTGCATTAGCCAAAGACCTGGGGTTCATCGCGTTAGGGCAT
CTCAGTCCTGCTGTGGGAGTCAAGATAGGACGACCCGAGTACTATAAGGC
TAGGAGCATCAAGCATTGCTGTCGCATGGTCGGCAACCGTCGTATGAGTA
TCGAAAGGAAGTATGATGGTGAATATTGCCAGATACATATCGATCTCTCC
AAGGACTCCAACTGGATTCAAATATTTTCTAAAAGCGGTAAAGATTCAAC
AGCAGACCGCGCCGGTATCCATCAAGTCATCAACGAGTCTTTGAACCTAA
GACGGCCGGGTTGCAAGGTTTCCCGGCGATGCATTCTGGAGGGCGAACTG
CTTGTTTGGAGTGATAAGCATGGCAAGATCGCAGATTTTCATAAGTTGCG
TAAGTTCATATCGCGTTCAGGCACTTTCATTGGAACTGAAAGCGACTCCC
CCCCACAACCTTATGAGCATCTGATGATAGTATTTTTTGACATCCTGCTC
ATCGATGACAATGTTTGTCTGAGGCTCCCACACCGGGAGCGGAGATTGCT
TCTGAAAGACATTATAGAGCCAATCCCAGGACGTGCGGATATATCTGAGC
AGTGGGTTGTTGACTTTTCCCATCATGGCGGTCAATCTCGACTAGAAAGT
GTCTTCCACAAAGGCATCGATGAGCGATGGGAAGGATTTGTCCTAAAAGC
ATGTGAAGATCCTTACTTTACAATATTTTCTGATGACAAGGACAATCCCT
CCTTCGGTCGCTGGATCAAGCTAAAGAAGGATTATATACCCGGACTGGGT
GATACCGTCGACCTCGCAATCATCGGCGCGAGGTATAACTCTCGGGATGC
TATGGCAATCAAGCAAGTCAAAAAGCTATTATGGACTGAATTCTTCATTG
GATGCCTCGTCAATGAAGAGATGGTTGTTCAATGTGGAGCCATACCAAAA
TTTCGGGTGCTGGATGTTATCAACCACAAATGCATGCATGTCAGATTCAT
GCAGTTCTTAAACCAATACGGCGAATTCTGCGCGCGCAGTCCAGACTCCG
AACACGGATTCAATCTTGAATACGGAGAGAGTGTAGTCAACCCTATGGAC
GTCGTCTTCAAAACACCCTTTGTCGTTGAGATGTTAGGCAGTGGCTTCGA
AAAGCCGTCTGGCGCCAGATACTATACACTGCGTTTCCCTAGGATCTTGA
AGGTCCTTTCTGACCGATCATTTGAGGACGCTGCGTCATATAGAGAGTTG
CAGTTATTAGCAGAAACCGCTCGAACCGTCCTTGATGAGGATCCAGGGAC
TCACGAGTATGAAGCCGCCAAACGGATGAAGCTGCGAGATTGCACGGAGT
GTACACCGGAGGGATCACAAAGTTTTCAGACAACACAGAGCCCTTGTCTC
CAGTCTTCAACTACTGCAAAAGATGACTCAGGTAACGGAGCATTCGTGTC
TCTCCCGAACAAAGCATCAAACGCCCCAGACGCGTTACCTGGCTCAACGA
GGCAAACCAAACGACGTCGCGAGAGCAGCGCTATGCAACGTACCATTCCC
ATCCATGTGGATCTCAATAGAGACCCCTCCCCGCCTGTAGGGCACAGTGT
ATGCGGCAATTACCTGACAGACAATGAAAATCTGTCTTCGCATGCAGCCG
GACAGAGGAAGAACTCAACCCAACCAACCGATTCTTCTGATGCAGAGAAA
GCCTCCCGCACCTGTCGAATGCCTAGTCCATTAACTAGCCTAGACAAGCT
TCAAAAGCACTCATTACCTGTTTATACACCGCTCCACTGCCATATTGGAT
CAAACGCAAGCCGGGAAATTTGCAATCGCCATCAACTTGGTGATGAAGTC
GTGACTGCCCACCTCGGCCAGAAACCAATCCGGCGCATTCTATCACCATT
GCTCCACAGACTTATATACGTTCATCATGGCATATCATCCGATCACATGG
CAGTGTCTCAATCCATACCAAATGCATGGAATATAGCACCCACCCTCAAA
GAGTTTGTCCGCTCATTAACACGCCTAGAGTCACGAACCCACCCCAGGAC
ATCCAACCCTCACGCAGTCTCGCACTACACAGCTTGCGGACTGGCCATGA
TACCTGGCAAGGAAGATGCGCTATGTACGGTTCTTCCCGATCTAATAAAA
AGCATAGGAAATGCTTTCCAGTCTCACAAATCCAACAGCCACCACCATGG
CGGAAAAGTCTTTATTCTCGATTCGAGCTTTCTCAAACTCAAGATCAGTA
ATTATGACACGGCAATTTGCCCCGGCCAGACATGGGAAGACATTAGCAAG
GTGTTTTTCTATGCCTGCGTGAGCTGGACGTTCAACGGGACTACAGGTTG
TGACACGTTTGAGAAGTACCAAGTCGGAGAATGTGACGCGCTCTACACGA
GGCCTAAGATCACGGTTAGCTTCGATAGACGTGAGTTGGGTCGGTTGGAG
GAAATATTCCGCACTGAGACACCGAACACTTATACTATTTGAATGGGGTT
CAAATTTGCTCGCTTGTGCGACTTACTATCAGCCCTCGAAGATAACAGGA
TCCTGAAAGCTGCCCATGAGGCCAAAGTTGTGAATCCTGACATTCGGGCC
GTATCACGATGGTTCGCCCAAAATGACAAGCAAATTCACGACAAAGATAC
CGACCAGTTGGCCCTCCTTTCCTGCATGTTTCCTGAGAAACGAACAGATC
GTGTCTACTGGCTACAGGATACATCCCTGGCCAAGATTATAGCACGGTGT
CTGCTCCTGGGCTGTTCACGGCGGCAGGAGCTGGAGCGTTGGCGTGTCTC
CGGGGGCGTAGACCTGGGACAATGCGTGGAGAATGTCATGCGGCAGGCTG
AAAACCATGTCACCAACGGCCAAGATGTCACTGTGGAGGAGATAGACAAA
GCTCTAGCTGAAATCGCCTCTCGTTGCAAGTTTTCTGGTCCTCGGGTGCG
AAGGCAGCGTACGGCAGTCAAGGTCGATCAGACGCTGTCCTCATTATATC
GACGACTAAGTAGCAGAGATGCGAAATGGCTTACACGGATGATACTAAAA
AGTTATTCTCCTGTTTCTCTACCGACAAACATGATCTTGAAACGCTTCCA
TTTCCTTCTTCCACATCTGCTTCTCTTTCAGGACTCTTTCGAACGCGCTT
TAAGCGTGCTGGGTACTAGCCCAATAAGACACTTCCCGCCTCAACCAGAG
CCTGCATTAGCCAAAGACCTGGGGTTCATCGCGTTAGGGCATCTCAGTCC
TGCTGTGGGAGTCAAGATAGGACGACCCGAGTACTATAAGGCTAGGAGCA
TCAAGCATTGCTGTCGCATGGTCGGCAACCGTCGTATGAGTATCGAAAGG
AAGTATGATGGTGAATATTGCCAGATACATATCGATCTCTCCAAGGACTC
CAACTGGATTCAAATATTTTCTAAAAGCGGTAAAGATTCAACAGCAGACC
GCGCCGGTATCCATCAAGTCATCAACGAGTCTTTGAACCTAAGACGGCCG
GGTTGCAAGGTTTCCCGGCGATGCATTCTGGAGGGCGAACTGCTTGTTTG
GAGTGATAAGCATGGCAAGATCGCAGATTTTCATAAGTTGCGTAAGTTCA
TATCGCGTTCAGGCACTTTCATTGGAACTGAAAGCGACTCCCCCCCACAA
CCTTATGAGCATCTGATGATAGTATTTTTTGACATCCTGCTCATCGATGA
CAATGTTTGTCTGAGGCTCCCACACCGGGAGCGGAGATTGCTTCTGAAAG
ACATTATAGAGCCAATCCCAGGACGTGCGGATATATCTGAGCAGTGGGTT
GTTGACTTTTCCCATCATGGCGGTCAATCTCGACTAGAAAGTGTCTTCCA
CAAAGGCATCGATGAGCGATGGGAAGGATTTGTCCTAAAAGCATGTGAAG
ATCCTTACTTTACAATATTTTCTGATGACAAGGACAATCCCTCCTTCGGT
CGCTGGATCAAGCTAAAGAAGGATTATATACCCGGACTGGGTGATACCGT
CGACCTCGCAATCATCGGCGCGAGGTATAACTCTCGGGATGCTATGGCAA
TCAAGCAAGTCAAAAAGCTATTATGGACTGAATTCTTCATTGGATGCCTC
GTCAATGAAGAGATGGTTGTTCAATGTGGAGCCATACCAAAATTTCGGGT
GCTGGATGTTATCAACCACAAATGCATGCATGTCAGATTCATGCAGTTCT
TAAACCAATACGGCGAATTCTGCGCGCGCAGTCCAGACTCCGAACACGGA
TTCAATCTTGAATACGGAGAGAGTGTAGTCAACCCTATGGACGTCGTCTT
CAAAACACCCTTTGTCGTTGAGATGTTAGGCAGTGGCTTCGAAAAGCCGT
CTGGCGCCAGATACTATACACTGCGTTTCCCTAGGATCTTGAAGGTCCTT
TCTGACCGATCATTTGAGGACGCTGCGTCATATAGAGAGTTGCAGTTATT
AGCAGAAACCGCTCGAACCGTCCTTGATGAGGATCCAGGGACTCACGAGT
ATGAAGCCGCCAAACGGATGAAGCTGCGAGATTGCACGGAGTGTACACCG
GAGGGATCACAAAGTTTTCAGACAACACAGAGCCCTTGTCTCCAGTCTTC
AACTACTGCAAAAGATGACTCAGGTAACGGAGCATTCGTGTCTCTCCCGA
ACAAAGCATCAAACGCCCCAGACGCGTTACCTGGCTCAACGAGGCAAACC
AAACGACGTCGCGAGAGCAGCGCTATGCAACGTACCATTCCCATCCATGT
GGATCTCAATAGAGACCCCTCCCCGCCTGTAGGGCACAGTGTATGCGGCA
ATTACCTGACAGACAATGAAAATCTGTCTTCGCATGCAGCCGGACAGAGG
AAGAACTCAACCCAACCAACCGATTCTTCTGATGCAGAGAAAGCCTCCCG
CACCTGTCGAATGCCTAGTCCATTAACTAGCCTAGACAAGCTTCAAAAGC
ACTCATTACCTGTTTATACACCGCTCCACTGCCATATTGGATCAAACGCA
AGCCGGGAAATTTGCAATCGCCATCAACTTGGTGATGAAGTCGTGACTGC
CCACCTCGGCCAGAAACCAATCCGGCGCATTCTATCACCATTGCTCCACA
GACTTATATACGTTCATCATGGCATATCATCCGATCACATGGCAGTGTCT
CAATCCATACCAAATGCATGGAATATAGCACCCACCCTCAAAGAGTTTGT
CCGCTCATTAACACGCCTAGAGTCACGAACCCACCCCAGGACATCCAACC
CTCACGCAGTCTCGCACTACACAGCTTGCGGACTGGCCATGATACCTGGC
AAGGAAGATGCGCTATGTACGGTTCTTCCCGATCTAATAAAAAGCATAGG
AAATGCTTTCCAGTCTCACAAATCCAACAGCCACCACCATGGCGGAAAAG
TCTTTATTCTCGATTCGAGCTTTCTCAAACTCAAGATCAGTAATTATGAC
ACGGCAATTTGCCCCGGCCAGACATGGGAAGACATTAGCAAGGTGTTTTT
CTATGCCTGCGTGAGCTGGACGTTCAACGGGACTACAGGTTGTGACACGT
TTGAGAAGTACCAAGTCGGAGAATGTGACGCGCTCTACACGAGGCCTAAG
ATCACGGTTAGCTTCGATAGACGTGAGTTGGGTCGGTTGGAGGAAATATT
CCGCACTGAGACACCGAACACTTATACTATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006310 | DNA recombination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003910 | DNA ligase (ATP) activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_54320-T1 | ATCC64974_54320-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR012308 |
| DBxref | InterPro:IPR012310 |
| DBxref | InterPro:IPR036599 |
| DBxref | PFAM:PF04675 |
| DBxref | PFAM:PF01068 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:3595744..3598987 + |
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