You are here

ATCC64974_54390-T1, ATCC64974_54390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54390-T1
Unique NameATCC64974_54390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3616657..3617195+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54390-T1 ID=ATCC64974_54390-T1|Name=ATCC64974_54390-T1|organism=Aspergillus niger N402|type=mRNA|length=539bp|location=Sequence derived from alignment at OGUI01000007.1:3616657..3617195+ (Aspergillus niger N402)
ATGGATATAAGTAGGATGCTGTTACTGTTCCATTGCTTTGAATTTAACAT CAGACTCAGACTCACAACAAACAAAGACACAAACTTCATCTCCATTCCTA CTACTCTTTTCACCACACAAATCTACACACACACAAGGTATGTAACATAT ACTACACCACTGCATAAGTTTCTCGGCTAATTATTAACCTCTGCAGTTAT CAAAATGCCCCGCGGAGCCGAATACGACGACGGAGTCCCTCACTCCGACA ACGCCATTGAGGCCGGCGAGACTAAGGTTCATGGAACGAACCCTGCCGTA TGTCCTTCTTTCAATCTGCAATCCTGCATTAAAAGAAGAAATGTTTGCTA ATTGACGTATAGAACGACCACCTCAACCGCGTCCAGCGCACCGCTCCCCT CCCCGAGGCCGCGCAGAGCAGCGGCGGCGAGTACAGCATCGGGGGCAGCT CAGGTCCGAACAAGTCCGGTAGCGGAAAGGGCGGACACGAGCCCAAGACG TTGGGCGAGAAGAAGGGATTGGGAGCTCACAAGGCATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3616657..3617195+

>ATCC64974_54390-T1 ID=ATCC64974_54390-T1|Name=ATCC64974_54390-T1|organism=Aspergillus niger N402|type=CDS|length=1464bp|location=Sequence derived from alignment at OGUI01000007.1:3616657..3617195+ (Aspergillus niger N402)
ATGGATATAAACTCACAACAAACAAAGACACAAACTTCATCTCCATTCCT
ACTACTCTTTTCACCACACAAATCTACACACACACAAGTTATCAAAATGC
CCCGCGGAGCCGAATACGACGACGGAGTCCCTCACTCCGACAACGCCATT
GAGGCCGGCGAGACTAAGGTTCATGGAACGAACCCTGCCAACGACCACCT
CAACCGCGTCCAGCGCACCGCTCCCCTCCCCGAGGCCGCGCAGAGCAGCG
GCGGCGAGTACAGCATCGGGGGCAGCTCAGGTCCGAACAAGTCCGGTAGC
GGAAAGGGCGGACACGAGCCCAAGACGTTGGGCGAGAAGAAGGGATTGGG
AGCTCACAAGGCATAAATGGATATAAACTCACAACAAACAAAGACACAAA
CTTCATCTCCATTCCTACTACTCTTTTCACCACACAAATCTACACACACA
CAAGTTATCAAAATGCCCCGCGGAGCCGAATACGACGACGGAGTCCCTCA
CTCCGACAACGCCATTGAGGCCGGCGAGACTAAGGTTCATGGAACGAACC
CTGCCAACGACCACCTCAACCGCGTCCAGCGCACCGCTCCCCTCCCCGAG
GCCGCGCAGAGCAGCGGCGGCGAGTACAGCATCGGGGGCAGCTCAGGTCC
GAACAAGTCCGGTAGCGGAAAGGGCGGACACGAGCCCAAGACGTTGGGCG
AGAAGAAGGGATTGGGAGCTCACAAGGCATAAATGGATATAAACTCACAA
CAAACAAAGACACAAACTTCATCTCCATTCCTACTACTCTTTTCACCACA
CAAATCTACACACACACAAGTTATCAAAATGCCCCGCGGAGCCGAATACG
ACGACGGAGTCCCTCACTCCGACAACGCCATTGAGGCCGGCGAGACTAAG
GTTCATGGAACGAACCCTGCCAACGACCACCTCAACCGCGTCCAGCGCAC
CGCTCCCCTCCCCGAGGCCGCGCAGAGCAGCGGCGGCGAGTACAGCATCG
GGGGCAGCTCAGGTCCGAACAAGTCCGGTAGCGGAAAGGGCGGACACGAG
CCCAAGACGTTGGGCGAGAAGAAGGGATTGGGAGCTCACAAGGCATAAAT
GGATATAAACTCACAACAAACAAAGACACAAACTTCATCTCCATTCCTAC
TACTCTTTTCACCACACAAATCTACACACACACAAGTTATCAAAATGCCC
CGCGGAGCCGAATACGACGACGGAGTCCCTCACTCCGACAACGCCATTGA
GGCCGGCGAGACTAAGGTTCATGGAACGAACCCTGCCAACGACCACCTCA
ACCGCGTCCAGCGCACCGCTCCCCTCCCCGAGGCCGCGCAGAGCAGCGGC
GGCGAGTACAGCATCGGGGGCAGCTCAGGTCCGAACAAGTCCGGTAGCGG
AAAGGGCGGACACGAGCCCAAGACGTTGGGCGAGAAGAAGGGATTGGGAG
CTCACAAGGCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54390ATCC64974_54390Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54390-T1.exon1ATCC64974_54390-T1.exon1Aspergillus niger N402exon
ATCC64974_54390-T1.exon2ATCC64974_54390-T1.exon2Aspergillus niger N402exon
ATCC64974_54390-T1.exon3ATCC64974_54390-T1.exon3Aspergillus niger N402exon
ATCC64974_54390-T1.exon4ATCC64974_54390-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54390-T1.cdsATCC64974_54390-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54390-T1ATCC64974_54390-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3616657..3617195 +