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ATCC64974_54760-T1, ATCC64974_54760-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54760-T1
Unique NameATCC64974_54760-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3776069..3778321-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54760-T1 ID=ATCC64974_54760-T1|Name=ATCC64974_54760-T1|organism=Aspergillus niger N402|type=mRNA|length=2253bp|location=Sequence derived from alignment at OGUI01000007.1:3776069..3778321- (Aspergillus niger N402)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
GAGTACTCCTTCATCTTGCCCTTTCTGGTATTGCAAAGACCTTGTCCTTT
GAGGCGTGTTGAACAACACCGTGCGCAGGCTTGTGACAGCAATCTAACAC
TGGTGGCTAGGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCA
TGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGTT
GCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCA
GAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGTG
AGATTTATTAGCATTCCCAATATTGCATCGCTTTGCCGCGCTACAACTAT
GTGCAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGC
AACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGA
TCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGC
CAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTC
CCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTA
TGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAAC
AGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCA
ATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGA
GGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATC
AGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGC
ATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGA
CGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGG
AGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCT
GAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTA
TGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCT
CATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACT
ACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATT
GCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGC
TGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGA
AATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATC
TGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGAC
GGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACG
ATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGA
TCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCAT
TAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACC
GCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGC
GAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTC
AGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATC
GACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGT
CTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGC
CAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGC
ACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGC
AGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTA
AATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAG
GAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGA
TCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCA
GGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCC
TGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3776069..3778321-

>ATCC64974_54760-T1 ID=ATCC64974_54760-T1|Name=ATCC64974_54760-T1|organism=Aspergillus niger N402|type=CDS|length=6246bp|location=Sequence derived from alignment at OGUI01000007.1:3776069..3778321- (Aspergillus niger N402)
GGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAAC
ATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAG
TCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAG
CCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCT
GTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCC
CTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAA
CGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCT
CAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCC
AGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGT
TGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCT
CCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATC
TGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTG
TGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCTGAACAG
GAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAA
GAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCC
GAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGG
AGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGA
CAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTT
GTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGC
GCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGA
GCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGACGGGTAC
CACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGT
AATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCA
GCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGT
CTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGC
TACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCC
GGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAAC
AGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCG
CAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGA
GCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGC
CCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATAT
CATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGT
GAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCG
ATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGAT
CTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAAT
GAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGT
CGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGAGTC
CCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTTC
CGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGACA
AGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCAT
GAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGATGGCGGCCGTGGACT
TCTCCAAAGTTTACTCTGCTACTTATAGCAGTGGACATGGATTCCGCTTC
CTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATCGACAAGCTAAGG
CCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACCACCTGCCCCGAA
ACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAAAGAATACAAACA
AGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAACCGCACCGAAGT
ATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGAAATGAGCCAAGG
ATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTGAGTCATCGTCTA
TGATCGCGGATGATGAGATTATGGCAATGTCTCAAAATGGTACATACTCA
CGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAATCTCAATTAGTGA
ACAGGAACACATACTCTATGGTGATCAGTTGTTGGATTATTTCATGACAG
TAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCACAACCGCCTGCC
AACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAATACTGCTCTCCA
TTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAGATCTACTACGGA
GAGGGGCAAATATCAAAGCACTATCTGAACAGGAGGAGACACCCCTCGTG
CGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGACGTTTCCACCGCT
ATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACTGGTTCGGCGCCA
CTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAAGGCAAATGGAAG
AGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCTACGCGTTACGTT
CTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAGATCAGAATGGGG
ACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTTCGTTTGGTTGAC
CTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTATAAATAATAAAGG
CGAGGCAGCCTCAACTATCGTCCGACGGGTACCACCTAATGAGCGCGACG
TCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGATCAATTAGATCCC
GACGTCACAGCACCTGTCACATCAGATCACCAGCCTCCCAGCCTTCCGCA
GGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGATTGCCGTCATAA
TGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGGAGCTCCAAGGCA
AACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGCACTTTATGCGCA
ACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTAGTATGCTGGTGG
CGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTGGACCGCTACGAA
CAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAATTCACCAGGCTCG
ACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGAAGGAAGATACGG
GATCTGACCAGGACCAACAACTTCGCACATATCATATGGCCCGTCAATTG
TGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGATCTTGTCCAACA
GACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCCATCGCAAGTTGG
TAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGATCCAATGGCCGCA
GAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGGGAAGGCTGCAGG
AGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCACATTCCCCATTC
CTGGTCCGACGGTATCCGTGGATGCCTGAGTCCCGGTTTATGAGTTCAAA
ATCGACGGTGACAGTGTCATGCGAAGGCGTTCCGATGACTGGATAAATGC
TACACATATTCTGAAAGTTGCCGGGTTTGACAAGCCTGCGAGGACTCGCA
TCCTGGAACGCGAGGTGCAGAAAGGGGTCCATGAAAAGGTGCAAGGTGGC
TATGGGAAATATCAAGATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTG
CTACTTATAGCAGTGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCG
CTGAGCGCAACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTT
GCTGGAGATCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTC
GTCGAAGCCAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAG
AGGTTGTCCCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTAT
CATCCCTATGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATC
TTTAGAACAGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGA
TTATGGCAATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGG
ATAAACGAGGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTA
TGGTGATCAGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAG
CGACACGCATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGC
GCGATTGACGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGG
TGACTTGGAGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAG
CACTATCTGAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACG
AACAATTATGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGA
CACAGTCTCATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAG
CAGAGACTACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGC
GAAGTATTGCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGA
TTTATTGCTGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTG
CTGCTCGAAATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGT
CCGCGATCTGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTAT
CGTCCGACGGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGT
CTATCACGATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTC
ACATCAGATCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTAC
CTCGGCATTAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGA
AACTCACCGCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGAC
GATGTTGCGAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCA
AAAGATTCAGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAG
AGTCAATCGACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTAC
GAATCCGTCTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGC
ATCAACGCCAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAAC
AACTTCGCACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCT
CGGCGCGCAGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGT
AAGCACTAAATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCC
TCAAAGAGGAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTA
GAATTCGATCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCC
AGAGGCCAGGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCG
TGGATGCCTGAGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTC
ATGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGT
TGCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGC
AGAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGAT
GGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54760ATCC64974_54760Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54760-T1ATCC64974_54760-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54760-T1.cdsATCC64974_54760-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54760-T1.exon3ATCC64974_54760-T1.exon3Aspergillus niger N402exon
ATCC64974_54760-T1.exon2ATCC64974_54760-T1.exon2Aspergillus niger N402exon
ATCC64974_54760-T1.exon1ATCC64974_54760-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR003163
DBxrefInterPro:IPR036887
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR018004
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3776069..3778321 -
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