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ATCC64974_54930-T1, ATCC64974_54930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54930-T1
Unique NameATCC64974_54930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3855467..3856596-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54930-T1 ID=ATCC64974_54930-T1|Name=ATCC64974_54930-T1|organism=Aspergillus niger N402|type=mRNA|length=1130bp|location=Sequence derived from alignment at OGUI01000007.1:3855467..3856596- (Aspergillus niger N402)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGGTATGCATTGCTACAGGTCATG
TGGTTCTTTCAGGGTTCGAAAACATCCTCTAATACTTGTCTTTTCACCCC
TCACAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAA
CATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTA
GTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTT
CGTGTGGACAAGGAGAAGGGCAAGTCGGAGTCCTCTGGATGACAATATCA
GCGTCAATTTACTGACTCTTTTTTCTCTACGTCTTTAGGTTACATTGATC
TTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGA
TACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGC
CACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGA
ACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACGTAA
GGAAACCTCTCGACTCAAGGCTATCGCGGACCGAGTACTCATAACATCAC
AGGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAA
GAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCA
AGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGAT
GCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAAC
CCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCC
AGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAA
AGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGAT
GGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCA
TGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATG
TCCGAGAGCGATGAGGGCGTTCCCGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3855467..3856596-

>ATCC64974_54930-T1 ID=ATCC64974_54930-T1|Name=ATCC64974_54930-T1|organism=Aspergillus niger N402|type=CDS|length=3708bp|location=Sequence derived from alignment at OGUI01000007.1:3855467..3856596- (Aspergillus niger N402)
GAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGA
AGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCAAG
GTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGC
CGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCC
AGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAG
TGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAG
GATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGG
CTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATG
GAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTC
CGAGAGCGATGAGGGCGTTCCCGAGTAAGTTACATTGATCTTTCCAAGCG
TCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGA
GCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACT
CCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATA
CGGACACTCCCACGATGCGTTCAAGATCTCCATCACATCGCCGAAATGGG
CGCATACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGC
TCTCCGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGT
ATCGGCCGTAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGAAGGA
TGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGAC
AGCTATGTCATGGTCAATGTGAAGCAGGAACCCCGACGTGTGGAACGAGG
TTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACATCAGC
AAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGGTTAC
CTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGCACCG
CCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGTTGCC
CCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTGGTAT
TCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAGGAGT
CTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGAGCAC
GATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGAACAT
GGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTTCCCG
AGTAAGTTACATTGATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTG
TCAAGTGCGAGGAAAGATACAACAAGAGCAAGGCAGTCCACTCCATCATG
CGCCACGTTGCCGAGGCCACTCAGACTCCTCTTGAGACCCTATACCAGCA
GATCGGATGGCCTTTGAACCGCAAATACGGACACTCCCACGATGCGTTCA
AGATCTCCATCACATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGT
ATGACAACATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGT
ATCCGTAGTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCAT
CGTGCTTCGTGTGGACAAGGAGAAGGATGTCGTTGACAAATTGCCGTTTC
TACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATGTGAA
GCAGGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTG
AAGAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGAC
CAAGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCG
ATGCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAA
ACCCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAG
CCAGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTC
AAAGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAG
ATGGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCT
CATGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCA
TGTCCGAGAGCGATGAGGGCGTTCCCGAGTAAGTTACATTGATCTTTCCA
AGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAAC
AAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCA
GACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCA
AATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACATCGCCGAAA
TGGGCGCATACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGATT
CTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTAT
TCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGA
AGGATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGT
TGACAGCTATGTCATGGTCAATGTGAAGCAGGAACCCCGACGTGTGGAAC
GAGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACAT
CAGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGG
TTACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGC
ACCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGT
TGCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTG
GTATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAG
GAGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGA
GCACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGA
ACATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTT
CCCGAGTAAGTTACATTGATCTTTCCAAGCGTCGAGTTTCTCCCGAAGAT
GTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAGGCAGTCCACTCCAT
CATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCTTGAGACCCTATACC
AGCAGATCGGATGGCCTTTGAACCGCAAATACGGACACTCCCACGATGCG
TTCAAGATCTCCATCACATCGCCGAAATGGGCGCATACGTTAAGCTCCTC
GAGTATGACAACATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAG
ACGTATCCGTAGTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCG
TCATCGTGCTTCGTGTGGACAAGGAGAAGGATGTCGTTGACAAATTGCCG
TTTCTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATG
TGAAGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54930ATCC64974_54930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54930-T1ATCC64974_54930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54930-T1.cdsATCC64974_54930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54930-T1.exon4ATCC64974_54930-T1.exon4Aspergillus niger N402exon
ATCC64974_54930-T1.exon3ATCC64974_54930-T1.exon3Aspergillus niger N402exon
ATCC64974_54930-T1.exon2ATCC64974_54930-T1.exon2Aspergillus niger N402exon
ATCC64974_54930-T1.exon1ATCC64974_54930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.7
NoteBUSCO:EOG09263CAH
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR024055
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR011488
DBxrefInterPro:IPR024054
DBxrefInterPro:IPR022967
DBxrefPFAM:PF00575
DBxrefPFAM:PF07541
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3855467..3856596 -
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