You are here

Home

ATCC64974_54960-T1, ATCC64974_54960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54960-T1
Unique NameATCC64974_54960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3864682..3866100-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54960-T1 ID=ATCC64974_54960-T1|Name=ATCC64974_54960-T1|organism=Aspergillus niger N402|type=mRNA|length=1419bp|location=Sequence derived from alignment at OGUI01000007.1:3864682..3866100- (Aspergillus niger N402)
ATGAGTTCGTTCCACAACTTGGTGCTACAGGCAAAGAAGGCGCGCTCTGT
CATCAATTACAGAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCA
AGCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGTGTATGTTGAATGC
CCCTCGTTGGATTCCGAGTTCTATGCTTAAGGTTTATGGCGTGTTCATCA
CTAACATACCCTCGTTGTACTACTACAGTGTGGAGCTAGTTCCGACTTCT
TCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATATTCGCCCA
CTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAATCGTTCT
ATCTGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATACCTCCGT
CAACGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAAGAACATA
TACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTGTTTCCAC
CAGCCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTATATTTCC
GGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGC
AGACCGTGTTATGGATCGGTTTGTGCACAGCGAACCGGCGTTTATGAAAT
CCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACT
GCGCGCTTATGGTTTCATCTCGCTCCGCTCATGTAAGTAGTGGCCTCCCA
ACCTCCCGTTTTAGTGCTCTTCTAACGCATTCCTCTTCATGCAGGTATTA
TACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTA
ACGTTCTTCTGCGTGACTGGGAAGCCGGACGCTTGCCAGTTCCTGTACCC
CCACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAG
ATCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACACATCACTGCA
TGCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGATGAGCCT
ACGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTT
CCTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATC
AGCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGATATTACA
TTAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAA
TGTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAGGG
AGGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATG
GTTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCC
AGATGGATGGCGTGCATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3864682..3866100-

>ATCC64974_54960-T1 ID=ATCC64974_54960-T1|Name=ATCC64974_54960-T1|organism=Aspergillus niger N402|type=CDS|length=3798bp|location=Sequence derived from alignment at OGUI01000007.1:3864682..3866100- (Aspergillus niger N402)
GTATTATACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGC
AGACTAACGTTCTTCTGCGTGACTGGGAAGCCGGACGCTTGCCAGTTCCT
GTACCCCCACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGAT
AATCAGATCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACACATC
ACTGCATGCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGAT
GAGCCTACGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATC
GCCGTTCCTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTG
GCAATCAGCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGAT
ATTACATTAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGC
CCCGAATGTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTG
TGAGGGAGGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGC
GTCATGGTTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCG
CATTCCAGATGGATGGCGTGCATAATGTGGAGCTAGTTCCGACTTCTTCC
CCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATATTCGCCCACTG
CGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAATCGTTCTATC
TGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATACCTCCGTCAA
CGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAAGAACATATAC
TCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTGTTTCCACCAG
CCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTATATTTCCGGC
CTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGCAGA
CCGTGTTATGGATCGGTTTGTGCACAGCGAACCGGCGTTTATGAAATCCA
TGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACTGCG
CGCTTATGGTTTCATCTCGCTCCGCTCATATGAGTTCGTTCCACAACTTG
GTGCTACAGGCAAAGAAGGCGCGCTCTGTCATCAATTACAGAGGGAGGAA
ATCAGATGCCAAGAAGAATAATCTGTCCAAGCACGCTGCAGGTTCATCAT
CAGTGTCCTCGTCAGTGTATTATACACTATACTTCCTTGAAACCTATGCT
CTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGCGTGACTGGGAAGCCGG
ACGCTTGCCAGTTCCTGTACCCCCACACATCCGTAAAGCCATGTACCGGG
ACTTGCAAGTAAAGATAATCAGATCACCCCCTTTTACTGACACCCCTACC
CTCATAGCCACACATCACTGCATGCAACTTCTAGTCTCATACTTGCGGTA
CACTGTACCACCGGATGAGCCTACGGTTTCGGATGACAGTTGGATTGGAT
CGTTGCTTACAGTATCGCCGTTCCTCCGAATAGTGGAGTACTTCTCCGCT
GAGATCGGGGATGGTGGCAATCAGCGGATGCAGCGAAAGGACTTCATGCA
CAATTTTCATAATGATATTACATTAAATGAAAAGGACGACATCAACATGT
TGGTCTTCCAGAATGCCCCGAATGTGCATCTGCATGGTTCCGTGGAAGAT
GTCTGGTTCGATGTTGTGAGGGAGGAATTGGCTTTACGAAAGGCGGCGCC
GCATCATGCAGAGCGCGTCATGGTTTGGACAGGATTGCCTGTCCTATTCA
GCTGCCAAGACTGTCGCATTCCAGATGGATGGCGTGCATAATGTGGAGCT
AGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCA
AGATATTCGCCCACTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTC
TGCAAATCGTTCTATCTGCTGCTTAACTCGCAGGAACAATGGATTACCCG
GCAATACCTCCGTCAACGTCGCCATGGAACACTTCCATCCCCAATAGATA
GCGAAAGAACATATACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCG
GATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTGGTCACATATACACTTT
CAAGTATATTTCCGGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTT
GCTGCTACCTTGCAGACCGTGTTATGGATCGGTTTGTGCACAGCGAACCG
GCGTTTATGAAATCCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGT
GCAAAGGACTACTGCGCGCTTATGGTTTCATCTCGCTCCGCTCATATGAG
TTCGTTCCACAACTTGGTGCTACAGGCAAAGAAGGCGCGCTCTGTCATCA
ATTACAGAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCAAGCAC
GCTGCAGGTTCATCATCAGTGTCCTCGTCAGTGTATTATACACTATACTT
CCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGC
GTGACTGGGAAGCCGGACGCTTGCCAGTTCCTGTACCCCCACACATCCGT
AAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAGATCACCCCCTTT
TACTGACACCCCTACCCTCATAGCCACACATCACTGCATGCAACTTCTAG
TCTCATACTTGCGGTACACTGTACCACCGGATGAGCCTACGGTTTCGGAT
GACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTTCCTCCGAATAGT
GGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATCAGCGGATGCAGC
GAAAGGACTTCATGCACAATTTTCATAATGATATTACATTAAATGAAAAG
GACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAATGTGCATCTGCA
TGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAGGGAGGAATTGGCTT
TACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGGTTTGGACAGGA
TTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCAGATGGATGGCG
TGCATAATGTGGAGCTAGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCA
GTCGAGATTCAGATCAAGATATTCGCCCACTGCGGTGTCACGGATTTCCT
ACCATTAAAGCTTGTCTGCAAATCGTTCTATCTGCTGCTTAACTCGCAGG
AACAATGGATTACCCGGCAATACCTCCGTCAACGTCGCCATGGAACACTT
CCATCCCCAATAGATAGCGAAAGAACATATACTCGGAACCCGGAGGATGA
TGCAGTGTTGTTATCGGATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTG
GTCACATATACACTTTCAAGTATATTTCCGGCCTGCGTCGCCGGCAGACG
CTTTGTTCAAGGCTTTGCTGCTACCTTGCAGACCGTGTTATGGATCGGTT
TGTGCACAGCGAACCGGCGTTTATGAAATCCATGTTCACCTCCAAAGCTG
AGCGCTGTGTCTTCGTGCAAAGGACTACTGCGCGCTTATGGTTTCATCTC
GCTCCGCTCATATGAGTTCGTTCCACAACTTGGTGCTACAGGCAAAGAAG
GCGCGCTCTGTCATCAATTACAGAGGGAGGAAATCAGATGCCAAGAAGAA
TAATCTGTCCAAGCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_54960ATCC64974_54960Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54960-T1ATCC64974_54960-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54960-T1.cdsATCC64974_54960-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54960-T1.exon3ATCC64974_54960-T1.exon3Aspergillus niger N402exon
ATCC64974_54960-T1.exon2ATCC64974_54960-T1.exon2Aspergillus niger N402exon
ATCC64974_54960-T1.exon1ATCC64974_54960-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.7
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3864682..3866100 -
Powered by Drupal