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ATCC64974_5550-T1, ATCC64974_5550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5550-T1
Unique NameATCC64974_5550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1689925..1691152-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5550-T1 ID=ATCC64974_5550-T1|Name=ATCC64974_5550-T1|organism=Aspergillus niger N402|type=mRNA|length=1228bp|location=Sequence derived from alignment at OGUI01000001.1:1689925..1691152- (Aspergillus niger N402)
ATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCCCAGCAGCC
AATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTTCCGTCCTA
CCAAGGTTAGTTCAATGGCCCTTATGGACCGGGCCAGCCATCTAATCGTC
TGTTTCTCCAACCATAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAAT
TATGTGACGTCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATC
GGGTGATGATGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTA
CAAAGTCGGTTCCCAGCAAGAAGTACGGCGCCCATCTAGCCAGGTTCACC
CACCACAGTCGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGGTATGTC
TGCTCCAGCGCGCCGCCATCCTTACCCTCTGTTCTGACCGGCCTAGATTC
ATTGCGCTTGTTGGACCTTCACAATGAAGGCTACATTCGCTACTTCCAGG
GTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGACTCC
TTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCGGCTC
TAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTGGCCT
TCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGCGTCA
GTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCAGTTT
CGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGCAGGG
GGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGTCGGG
ACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCGTTAA
GGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCGGTAT
CAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACCCGAC
GGGCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGACATGCTAGTGTG
GGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCAATGA
CTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCCGAGG
TACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTCCAGA
GGACCCTTCCAGATCTTCTGAAAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:1689925..1691152-

>ATCC64974_5550-T1 ID=ATCC64974_5550-T1|Name=ATCC64974_5550-T1|organism=Aspergillus niger N402|type=CDS|length=3339bp|location=Sequence derived from alignment at OGUI01000001.1:1689925..1691152- (Aspergillus niger N402)
ATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTACATTCGCTACTTC
CAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGA
CTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCG
GCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTG
GCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGC
GTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCA
GTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGC
AGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGT
CGGGACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCG
TTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCG
GTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACC
CGACGGGCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGACATGCTAG
TGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCA
ATGACTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCC
GAGGTACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTC
CAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATTCCGAGGCCCAAAG
CAGGATACCTCTAATTATGTGACGTCGCTGGACTTTGATGACCAAGGAGA
TTACTTGGTGGCATCGGGTGATGATGAGACTATCCAGGTTTTCGATATCA
AGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAAGTACGGCGCCCAT
CTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCCATGCGAGCACCAA
GGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCC
CAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTT
CCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTA
CATTCGCTACTTCCAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTAT
CTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCA
CTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGAC
TCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCAT
CCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAA
GCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCC
TTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCA
AGCACTTGCTTGTCGGGACAGACTACCATGGGCATTTCATTCTCGATGCC
TTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGG
AAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATG
CGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGGTTCGGGAGATCAT
TCCGACATGCTAGTGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGG
TCTATTGCAGCCAATGACTAGACTATCACATCGAGGACGGACTGCCATCG
TTGAATACAATCCGAGGTACAACATGATTGCGTCTGCCGACAAAGAGACA
GTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATT
CCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACGTCGCTGGACTTTG
ATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGATGAGACTATCCAG
GTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAA
GTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCC
ATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGC
GCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACA
TCATTCGTAGTTTCCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTC
ACAATGAAGGCTACATTCGCTACTTCCAGGGTCACACCGACAAAGTCACC
TGTTTAGCTCTATCTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGA
CGATACCGTTGCACTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAAT
TGAAACTTGCGACTCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTC
ATTGCCATTGCATCCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCG
CAACTACGACAAAGCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGG
AACGGTATACGCCTTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTC
TCCAATGATGGCAAGCACTTGCTTGTCGGGACAGACTACCATGGGCATTT
CATTCTCGATGCCTTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGG
CCGGATCACCCGGAAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTC
GGTCAGGGAGATGCGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGG
TTCGGGAGATCATTCCGACATGCTAGTGTGGGATCTACAACAATCTCCTC
CAGAGCCAAACGGTCTATTGCAGCCAATGACTAGACTATCACATCGAGGA
CGGACTGCCATCGTTGAATACAATCCGAGGTACAACATGATTGCGTCTGC
CGACAAAGAGACAGTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTG
AAAAGTAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACG
TCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGA
TGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGG
TTCCCAGCAAGAAGTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGT
CGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAAC
CGCAACCGACGGCGCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAG
AAGGTCTCGGACATCATTCGTAGTTTCCGTCCTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5550ATCC64974_5550Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5550-T1ATCC64974_5550-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5550-T1.cdsATCC64974_5550-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5550-T1.exon3ATCC64974_5550-T1.exon3Aspergillus niger N402exon
ATCC64974_5550-T1.exon2ATCC64974_5550-T1.exon2Aspergillus niger N402exon
ATCC64974_5550-T1.exon1ATCC64974_5550-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1689925..1691152 -
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