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ATCC64974_55540-T1, ATCC64974_55540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55540-T1
Unique NameATCC64974_55540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4027349..4029256+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55540-T1 ID=ATCC64974_55540-T1|Name=ATCC64974_55540-T1|organism=Aspergillus niger N402|type=mRNA|length=1908bp|location=Sequence derived from alignment at OGUI01000007.1:4027349..4029256+ (Aspergillus niger N402)
ATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAATG
GCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTGTCAGTAC
TATTTCATGACGCGATACAATGATCGAATTTGATGCTGAATTATGCACAG
ATACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAAC
ACCCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGAT
CGCTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAAT
GCCCGGACATCCTCAAAAATGTAAGTCTCGGTAGTACTGTCGTGTCTGAG
CAGGCCCTAAAAATCGTAGCGGCAAGCAGCAAAAGAGCATCCGATGAGGG
CACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATG
TCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACC
CTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTT
GGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCA
AATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATT
GTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGG
ATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAG
GCACTTTGGCGTTTGGGAATCAATCGGTAACAAATCCAATACCTAATATG
CTATGACGATGTCTAACCTGCGTAGGGGCCAAGCACAAGCCATACTGGGG
ACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGAC
GATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGC
TTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGG
TCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGAT
TACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGC
ACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGT
TCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATC
GTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACG
GTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCA
TCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATG
GCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGT
CGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTC
AATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCT
GCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCT
CTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGA
GCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACC
TCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCAT
GTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGT
GGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAG
GACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAA
GAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGG
ATGGGTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4027349..4029256+

>ATCC64974_55540-T1 ID=ATCC64974_55540-T1|Name=ATCC64974_55540-T1|organism=Aspergillus niger N402|type=CDS|length=7008bp|location=Sequence derived from alignment at OGUI01000007.1:4027349..4029256+ (Aspergillus niger N402)
ATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAATG
GCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATACAAAA
AGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCC
GAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGAC
CGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGGAC
ATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCACAGCA
GAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCCCGAC
TTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTTAATG
AGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGCGCAG
CCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAATTCCA
TACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTATATG
ATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATGGGAG
GTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCACTTT
GGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGACACCC
AGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGATGAG
GAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTTCTGA
CGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTCCAGC
TGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTACATC
ACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGA
ACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTCCTCT
CCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGTTGAG
CGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGTTCCA
CGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACC
TCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGCCGGC
AAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAA
CGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAATACC
TAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGC
GGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTC
CTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCA
AGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTCCAAA
TCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGCAT
CCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGA
CTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGG
GATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGAAGAT
CGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGT
GAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAA
TGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATACAA
AAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCT
CCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTG
ACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGG
ACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCACAG
CAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCCCG
ACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTTAA
TGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGCGC
AGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAATTC
CATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTATA
TGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATGGG
AGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCACT
TTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGACAC
CCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGATG
AGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTTCT
GACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTCCA
GCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTACA
TCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTA
GAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTCCT
CTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGTTG
AGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGTTC
CACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTA
CCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGCCG
GCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTC
AACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAATA
CCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCG
GCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCC
TCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCC
CAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTCCA
AATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGC
ATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCC
GACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACC
GGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGAAG
ATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGG
GTGAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAG
AATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTATAC
AAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCC
CTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCT
TGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCC
GGACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGCAC
AGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGTCC
CGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCCTT
AATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTGGC
GCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAAAT
TCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTGTA
TATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGATG
GGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGGCA
CTTTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGGAC
ACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGACGA
TGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGCTT
CTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGGTC
CAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGATTA
CATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCAC
TAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGTTC
CTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATCGT
TGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACGGT
TCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCATC
TACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATGGC
CGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGTCG
TCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTCAA
TACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCTGC
CGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCTCT
CCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGAGC
CCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACCTC
CAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCATGT
GCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGTGG
CCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAGGA
CCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAAGA
AGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGGAT
GGGTGAATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAA
AGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTAT
ACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACAC
CCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCG
CTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGC
CCGGACATCCTCAAAAATCGGCAAGCAGCAAAAGAGCATCCGATGAGGGC
ACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATGT
CCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACCC
TTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTTG
GCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCAA
ATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATTG
TATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGGA
TGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAGG
CACTTTGGCGTTTGGGAATCAATCGGGGCCAAGCACAAGCCATACTGGGG
ACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGAC
GATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGC
TTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGG
TCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGAT
TACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGC
ACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGT
TCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATC
GTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACG
GTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCA
TCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATG
GCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGT
CGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTC
AATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCT
GCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCT
CTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGA
GCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACC
TCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCAT
GTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGT
GGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAG
GACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAA
GAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGG
ATGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS81ATCC64974_55540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55540-T1.exon1ATCC64974_55540-T1.exon1Aspergillus niger N402exon
ATCC64974_55540-T1.exon2ATCC64974_55540-T1.exon2Aspergillus niger N402exon
ATCC64974_55540-T1.exon3ATCC64974_55540-T1.exon3Aspergillus niger N402exon
ATCC64974_55540-T1.exon4ATCC64974_55540-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55540-T1.cdsATCC64974_55540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55540-T1ATCC64974_55540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011335
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR027421
DBxrefInterPro:IPR006166
DBxrefPFAM:PF02732
ProductCrossover junction endonuclease mus81
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4027349..4029256 +
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