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ATCC64974_55560-T1, ATCC64974_55560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55560-T1
Unique NameATCC64974_55560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4037243..4039501+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55560-T1 ID=ATCC64974_55560-T1|Name=ATCC64974_55560-T1|organism=Aspergillus niger N402|type=mRNA|length=2259bp|location=Sequence derived from alignment at OGUI01000007.1:4037243..4039501+ (Aspergillus niger N402)
ATGTCGGTCCCTAGGCCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGG
CCCAAGGCCACCTATGGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAA
CTCCCATCAGGCGTCCCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCA
ACTACCCACCCCAAAACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCC
TCACATCGTTGAGGATGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTG
TCATCAGTGAAGCAAACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCG
TCGGGTGCGGCAGTCGTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCA
TGTCCGCAGTTATGGCCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCG
AGATTACGGAACAGAACGGCAATCGGTACATCACCCAGCTGTCTCGTGCC
TTGACTATCCCAGAGAGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCT
AGCAGTCGGATTGAACTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTG
CTGTATGCTTATATATTGCCTGCCGTCGGCAGGATGGCAACACCATCATG
CTCATCGATTTTGCCGATGTTCTCATGATCAACGTGTTCAAGCTCGGTCG
GACCTACAAAGCACTACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTC
TGATGAACCCGATTGATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAG
CTTGAATTTGGGTCGGCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTAT
CGTACAGCGAATGAACCGCGATTGGATGACGACGGGTCGTCGTCCCGCTG
GTATTTGTGGTGCCGCCTTGATCCTTGCAGCCCGAATGAACAACTTTCGC
CGCACCGTTCGAGAGGTTGTCTACGTCGTCAAAGTCACCGAGATCACTAT
CAGCCAACGTTTGAACGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAG
TCGACCAGTTCCGTTCCGTGCAGCTGGAGAATGCGCATGACCCACCTTCT
TTTGCCAGGGCTAGAGAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACG
GCCCACGGAAACGGCTGCGGAGATTGAGGGTGATATACAAGAAGCACAGC
AACATAGGCGTGTCGACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATT
GACCCGGCATTACTAGCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGC
CTCTGCTGCAAGCGAAGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGT
CCGGTCGCCAGAAGGGTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCA
GATCAGATTGCCTCGGAAGAGGCTTTGGAGAATGAAATGACCGCGCTATT
ATCCAAAGGATCGAACATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGG
TCGTGTCTGATAATACGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCG
GAGGTGTCTAACTGCTTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACG
GATTTGGGTCCATGAGAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAG
CGCTAAAGCGAGCTCTGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGT
CGCGTGCACAAGCCGCGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAAC
TTATCTTGAAGGCGAGGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTT
CGACCCCTGCCGAAGCTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGC
AAAAAGATCAATTATCGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGC
TGACGAAGCCTCCAAACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTC
GCAGCCAGAGTGTCGTGTCACGACGCAGCGCCAGTATCGAACCAGAGGCG
GCCTCGAGGCGTACCGGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGG
AGCTTCTTTGTCTGCCGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTG
CTCAAGCCCCGACGGATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTC
CTCGGTCCTGCGGATGGAGCAAAGAACGAGTATTCAGATGACGAGCAAGA
GGATGACTACGACGAGGATGATGACATGGAGGATGATGGGGTTGACGCGG
CGCTTGCTGGAACCTATGGTGACTATTACGACGAGGGGAGTGATTATGGT
AGTGATTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4037243..4039501+

>ATCC64974_55560-T1 ID=ATCC64974_55560-T1|Name=ATCC64974_55560-T1|organism=Aspergillus niger N402|type=CDS|length=2259bp|location=Sequence derived from alignment at OGUI01000007.1:4037243..4039501+ (Aspergillus niger N402)
ATGTCGGTCCCTAGGCCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGG
CCCAAGGCCACCTATGGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAA
CTCCCATCAGGCGTCCCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCA
ACTACCCACCCCAAAACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCC
TCACATCGTTGAGGATGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTG
TCATCAGTGAAGCAAACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCG
TCGGGTGCGGCAGTCGTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCA
TGTCCGCAGTTATGGCCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCG
AGATTACGGAACAGAACGGCAATCGGTACATCACCCAGCTGTCTCGTGCC
TTGACTATCCCAGAGAGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCT
AGCAGTCGGATTGAACTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTG
CTGTATGCTTATATATTGCCTGCCGTCGGCAGGATGGCAACACCATCATG
CTCATCGATTTTGCCGATGTTCTCATGATCAACGTGTTCAAGCTCGGTCG
GACCTACAAAGCACTACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTC
TGATGAACCCGATTGATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAG
CTTGAATTTGGGTCGGCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTAT
CGTACAGCGAATGAACCGCGATTGGATGACGACGGGTCGTCGTCCCGCTG
GTATTTGTGGTGCCGCCTTGATCCTTGCAGCCCGAATGAACAACTTTCGC
CGCACCGTTCGAGAGGTTGTCTACGTCGTCAAAGTCACCGAGATCACTAT
CAGCCAACGTTTGAACGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAG
TCGACCAGTTCCGTTCCGTGCAGCTGGAGAATGCGCATGACCCACCTTCT
TTTGCCAGGGCTAGAGAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACG
GCCCACGGAAACGGCTGCGGAGATTGAGGGTGATATACAAGAAGCACAGC
AACATAGGCGTGTCGACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATT
GACCCGGCATTACTAGCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGC
CTCTGCTGCAAGCGAAGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGT
CCGGTCGCCAGAAGGGTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCA
GATCAGATTGCCTCGGAAGAGGCTTTGGAGAATGAAATGACCGCGCTATT
ATCCAAAGGATCGAACATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGG
TCGTGTCTGATAATACGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCG
GAGGTGTCTAACTGCTTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACG
GATTTGGGTCCATGAGAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAG
CGCTAAAGCGAGCTCTGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGT
CGCGTGCACAAGCCGCGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAAC
TTATCTTGAAGGCGAGGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTT
CGACCCCTGCCGAAGCTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGC
AAAAAGATCAATTATCGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGC
TGACGAAGCCTCCAAACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTC
GCAGCCAGAGTGTCGTGTCACGACGCAGCGCCAGTATCGAACCAGAGGCG
GCCTCGAGGCGTACCGGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGG
AGCTTCTTTGTCTGCCGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTG
CTCAAGCCCCGACGGATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTC
CTCGGTCCTGCGGATGGAGCAAAGAACGAGTATTCAGATGACGAGCAAGA
GGATGACTACGACGAGGATGATGACATGGAGGATGATGGGGTTGACGCGG
CGCTTGCTGGAACCTATGGTGACTATTACGACGAGGGGAGTGATTATGGT
AGTGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_55560ATCC64974_55560Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55560-T1.exon1ATCC64974_55560-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55560-T1.cdsATCC64974_55560-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55560-T1ATCC64974_55560-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092613QA
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR011665
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF00382
DBxrefPFAM:PF07741
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4037243..4039501 +
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