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ATCC64974_5570-T1, ATCC64974_5570-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5570-T1
Unique NameATCC64974_5570-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1694942..1696369+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5570-T1 ID=ATCC64974_5570-T1|Name=ATCC64974_5570-T1|organism=Aspergillus niger N402|type=mRNA|length=1428bp|location=Sequence derived from alignment at OGUI01000001.1:1694942..1696369+ (Aspergillus niger N402)
ATGTCTGTACAACTCACTCCCTCCAAGCAGGTATGTGATGTCACGTCTCT
CGCCTCCCACTTTCGACGCGTAATTAAAGGCAGATAAGCTAACACGCGTT
GCTTCCATAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGC
CTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTT
GACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAGGT
TGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAA
ATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGGTGAGTGAC
ACGTCCGTTACGCGTCACGCGTAAAGTGGAATTTTGCGCTTCCCGCCCCG
CAACAATTGGCATGTGCGCTAACGCCGCATTCTCGCACCCTACAGATCTG
GCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTG
ATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAG
CGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCAT
TGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCG
AGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCC
GAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCG
CACCTACCTCTTCGACGCTATTGATACTAGTATGTACCTCCAACCGGGGT
TGTGATTGGTCAATGGATGCTAACCGCTGCAGTCCCCTGCATTGCCAAGA
AGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCT
CAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTC
CTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCA
CCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTC
GCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGT
TGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTG
ACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG
TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAA
GTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG
CGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCT
GGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAA
CGGCCTCAGCTTCGATGAAGACTTCTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1694942..1696369+

>ATCC64974_5570-T1 ID=ATCC64974_5570-T1|Name=ATCC64974_5570-T1|organism=Aspergillus niger N402|type=CDS|length=4764bp|location=Sequence derived from alignment at OGUI01000001.1:1694942..1696369+ (Aspergillus niger N402)
ATGTCTGTACAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAA
CCTCAAGATGAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGG
AGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAG
CCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAG
CGAGCCTCTGCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCA
AGTACCATGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGG
ACCGCCGAGGAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCG
CCTGAACGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCG
CTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGC
GAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGAT
GGAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCA
AGGAGCCCAAGCAGCGCACCTACCTCTTCGACGCTATTGATACTATCCCC
TGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGA
GTCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCT
TCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC
ATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT
GCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA
GCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAG
GAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAA
GCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCC
TCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG
TCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGA
CTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCA
AGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAATGTCTGTA
CAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGAT
GAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGC
CTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAA
GCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCT
GCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATG
AGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAG
GAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGA
CGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCG
ATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAG
GTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACAT
CCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCA
AGCAGCGCACCTACCTCTTCGACGCTATTGATACTATCCCCTGCATTGCC
AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTT
CGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCG
GTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGT
CTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGA
CTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGG
TTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTG
ACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTG
TCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACA
AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG
CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAA
GGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACA
GCAACGGCCTCAGCTTCGATGAAGACTTCTAAATGTCTGTACAACTCACT
CCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTC
GCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCG
TTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAG
GTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGA
AAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGC
AGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGAT
CTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCG
CTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTG
TCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAG
GCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGA
GACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCGCA
CCTACCTCTTCGACGCTATTGATACTATCCCCTGCATTGCCAAGAAGGCC
GATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCG
TCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCG
CTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTC
TCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTG
CCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAG
ACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCT
CTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACAT
CGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT
ACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGT
AAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGT
CATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCC
TCAGCTTCGATGAAGACTTCTAAATGTCTGTACAACTCACTCCCTCCAAG
CAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGCCTGTCAA
GAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGA
CTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAGGTTGCGCCC
GGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAAATCCCCA
CCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGCAGATGTACA
AGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTGTCCAAG
GATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCAT
CTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGA
ACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGC
TTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTC
TCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACCTCT
TCGACGCTATTGATACTATCCCCTGCATTGCCAAGAAGGCCGATTGGGCC
ATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTCTCGTTGC
TTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCT
TCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAG
CTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTT
CTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCG
TCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTT
GCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGT
CGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCA
CCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAAC
TTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGTCATGGCCAG
CACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAGCTTCG
ATGAAGACTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005971ribonucleoside-diphosphate reductase complex
Vocabulary: Molecular Function
TermDefinition
GO:0004748ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005515protein binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0009263deoxyribonucleotide biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RNR2ATCC64974_5570Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5570-T1.exon1ATCC64974_5570-T1.exon1Aspergillus niger N402exon
ATCC64974_5570-T1.exon2ATCC64974_5570-T1.exon2Aspergillus niger N402exon
ATCC64974_5570-T1.exon3ATCC64974_5570-T1.exon3Aspergillus niger N402exon
ATCC64974_5570-T1.exon4ATCC64974_5570-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5570-T1.cdsATCC64974_5570-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5570-T1ATCC64974_5570-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009078
DBxrefInterPro:IPR033909
DBxrefInterPro:IPR030475
DBxrefInterPro:IPR000358
DBxrefInterPro:IPR012348
DBxrefPFAM:PF00268
Product small subunit
ProductRibonucleotide-diphosphate reductase (RNR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1694942..1696369 +
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