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ATCC64974_55950-T1, ATCC64974_55950-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55950-T1
Unique NameATCC64974_55950-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4194041..4195007-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55950-T1 ID=ATCC64974_55950-T1|Name=ATCC64974_55950-T1|organism=Aspergillus niger N402|type=mRNA|length=967bp|location=Sequence derived from alignment at OGUI01000007.1:4194041..4195007- (Aspergillus niger N402)
ATGGCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAG
CATCCCAACCATTGTGCCCTCTTGTATCTCGACTTTAATAATGTTACGGA
TGATTCTCGACTTGATATACTGACATATGGACTTGATAGCCCCGTTTACG
CAGTAAGTCACTTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCA
AGCGACCCTCAAGGTAGCTTGGCTTCGTTGCATCAAGCGGAGAATCTGCC
ATCGAACAAGCATCTCTCGACACGGTTAACTGATCTCCAACTTGTATAGC
CCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTC
GGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGC
CGTCCTCAGACCTGACCTGATCGTCAAGAGTACGTGGAAGCTTCACAGAG
CTTTATACCACTGGGATATGCCATCGCATATAATTTCGGATGATGTGATA
CTAATCTCGTGATACAGACATTGTCCCCATTGTCATGGCGGGTATCATTG
GTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAG
AAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGT
CGGTTTGGCTGGTATGGCAGCTGGGTAAGCTTCTCAACATGGCACCTTTC
AGTTCCGGTAAGCTTGGGACTAATTCAGTATCTCTAGTTTTGCCATTGGT
ATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTA
TGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGGTGAGTCAC
AACAACATAGCGATATAATTGGTCTGCCCCATCTAACAAGGATGTTTTAC
AGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGA
TCGACGCCACTTGCTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4194041..4195007-

>ATCC64974_55950-T1 ID=ATCC64974_55950-T1|Name=ATCC64974_55950-T1|organism=Aspergillus niger N402|type=CDS|length=2916bp|location=Sequence derived from alignment at OGUI01000007.1:4194041..4195007- (Aspergillus niger N402)
GTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATC
GACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCC
GTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTC
ATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCAT
TGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGAC
AGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCC
GTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGC
ACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAA
GGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCG
TCAAGACCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTT
ATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTA
ATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAA
CAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGT
CTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTC
TGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTG
TACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGG
TATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGT
CTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTG
TCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTT
ACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTTATCGTTGCTCTTCT
GATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATTGGT
ATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTA
TGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCC
CCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTC
CTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCAT
TCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCC
CTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCG
GAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCC
GTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTTACGCAATGGCCACC
GAACTTTGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTT
CGAGGATCGACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGC
AGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTT
TGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCG
GGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGA
TTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAG
GTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCC
TTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGA
ACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGA
CCTGATCGTCAAGACCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGT
ACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCC
ACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAA
CTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTC
GCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTAT
CTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGG
TCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGT
TTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCG
GCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGG
TGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGA
CCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTTATCGTT
GCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTG
CCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCC
CGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGA
CATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCG
TGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACT
GGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGC
AGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCAC
CTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTG
GAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTTACGCAA
TGGCCACCGAACTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA3_1ATCC64974_55950Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55950-T1ATCC64974_55950-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55950-T1.cdsATCC64974_55950-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55950-T1.exon6ATCC64974_55950-T1.exon6Aspergillus niger N402exon
ATCC64974_55950-T1.exon5ATCC64974_55950-T1.exon5Aspergillus niger N402exon
ATCC64974_55950-T1.exon4ATCC64974_55950-T1.exon4Aspergillus niger N402exon
ATCC64974_55950-T1.exon3ATCC64974_55950-T1.exon3Aspergillus niger N402exon
ATCC64974_55950-T1.exon2ATCC64974_55950-T1.exon2Aspergillus niger N402exon
ATCC64974_55950-T1.exon1ATCC64974_55950-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.9
NoteantiSMASH:Cluster_10000071.8
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR011555
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4194041..4195007 -
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