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ATCC64974_56000-T1, ATCC64974_56000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56000-T1
Unique NameATCC64974_56000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4212272..4212946-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56000-T1 ID=ATCC64974_56000-T1|Name=ATCC64974_56000-T1|organism=Aspergillus niger N402|type=mRNA|length=675bp|location=Sequence derived from alignment at OGUI01000007.1:4212272..4212946- (Aspergillus niger N402)
ATGGCCCCCGTTGCTGTACGTTTCCTTCCTTGAGACTGCTTTGCTGTTCT
CCCCGAATGGGTCCATATCCATGAAGATGTTTTCTCTGCGTTGAAAAATG
AGAGAATACACTTTTCATGGGAAGAAACCCCGGGGATCCGACATTATGGA
ACAGTAGGCTAATCATATATTTTCGGACTATAGACTCGTGGTCGCAAGGC
CCAGAAGGTCACCAAGAAGGTATGTGCTTATCGCAATCGCAATCGCAGGC
GCAAGTAAAAATCGTGGGTACTAATTGTTTCTCTTATAGTTCGTCATCAA
CGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGA
AGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGT
GACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGC
TCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCACCTT
CCATTGATTTAATACAAGTTGGCAAGATGCTAATTGTTCCTCCAACAGCA
CCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCGTC
TCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAACGA
CGAGGGCGAGGAGGATGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4212272..4212946-

>ATCC64974_56000-T1 ID=ATCC64974_56000-T1|Name=ATCC64974_56000-T1|organism=Aspergillus niger N402|type=CDS|length=1500bp|location=Sequence derived from alignment at OGUI01000007.1:4212272..4212946- (Aspergillus niger N402)
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL22ATCC64974_56000Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56000-T1ATCC64974_56000-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56000-T1.cdsATCC64974_56000-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56000-T1.exon4ATCC64974_56000-T1.exon4Aspergillus niger N402exon
ATCC64974_56000-T1.exon3ATCC64974_56000-T1.exon3Aspergillus niger N402exon
ATCC64974_56000-T1.exon2ATCC64974_56000-T1.exon2Aspergillus niger N402exon
ATCC64974_56000-T1.exon1ATCC64974_56000-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR038526
DBxrefInterPro:IPR002671
DBxrefPFAM:PF01776
Product60S ribosomal protein L22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4212272..4212946 -
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